Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene18661 SustainPine v2.0 684
AutoFact: Cytochrome P450 716B2 n=2 Tax=Picea sitchensis RepID=C16B2_PICSI 0.0
FL-Next: sp=Cytochrome P450 716B2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 716b2-like 0.0
C-terminus
sp_v2.0_unigene18766 SustainPine v2.0 581
AutoFact: NXRV075_D04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV075_D04 5' similar to Arabidopsis thaliana sequence At1g37110 see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_011062 [Vitis vinifera] 0.0
Internal
sp_v2.0_unigene18970 SustainPine v2.0 782
AutoFact: Phospholipid-transporting ATPase (Fragment) n=1 Tax=Cucumis melo subsp. melo RepID=E5GCB8_CUCME 0.0
FL-Next: sp=Putative phospholipid-transporting ATPase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: aminophospholipid atpase 0.0
Internal
sp_v2.0_unigene19062 SustainPine v2.0 1510
AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9T062_RICCO 0.0
FL-Next: tr=Cinnamoyl-CoA reductase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: cinnamoyl- reductase 0.0
Complete
sp_v2.0_unigene19098 SustainPine v2.0 764
AutoFact: phosphopantetheine adenylyltransferase [Arabidopsis thaliana] sp|Q9ZPV8.1|COAD_ARATH RecName: Full=Phosphopantetheine adenylyltransferase; AltName: Full=Dephospho-CoA pyrophosphorylase; Short=AtCoaD; AltName: Full=Pantetheine-phosphate adenylyltransferase 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphopantetheine adenylyltransferase 3.97443e-27
N-terminus
sp_v2.0_unigene19110 SustainPine v2.0 827
AutoFact: PLAC8 family protein [Arabidopsis thaliana] sp|Q9M9A5.1|PCR6_ARATH RecName: Full=Protein PLANT CADMIUM RESISTANCE 6; Short=AtPCR6 gb|AAF69715.1|AC016041_20 F27J15.18 [Arabidopsis thaliana] gb|AAR24706.1| At1g49030 [Arabidopsis thaliana] gb|AAS47652.1| At1 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene19114 SustainPine v2.0 583
AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 71a1-like 0.0
C-terminus
sp_v2.0_unigene19247 SustainPine v2.0 675
AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9GRC2_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter c family member 5-like 0.0
Internal
sp_v2.0_unigene19368 SustainPine v2.0 1654
AutoFact: PPPDE putative thiol peptidase family protein [Arabidopsis thaliana] ref|NP_973987.1| PPPDE putative thiol peptidase family protein [Arabidopsis thaliana] gb|AAL87252.1| unknown protein [Arabidopsis thaliana] gb|AAM45073.1| unknown protein [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: upf0326 protein at4g17486-like 0.0
Complete
sp_v2.0_unigene19378 SustainPine v2.0 402
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_028182 [Vitis vinifera] 1.59676e-22
Internal
sp_v2.0_unigene19411 SustainPine v2.0 903
AutoFact: Reverse transcriptase, gag, polyprotein n=1 Tax=Volvox carteri f. nagariensis RepID=O04013_VOLCA 3.00018e-42
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: copia-type polyprotein 0.0
N-terminus
sp_v2.0_unigene19498 SustainPine v2.0 799
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 5 -3 exoribonuclease 3-like 0.0
N-terminus
sp_v2.0_unigene19552 SustainPine v2.0 425
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 3.45145e-40
Internal
sp_v2.0_unigene19593 SustainPine v2.0 446
AutoFact: S-locus lectin protein kinase family protein n=1 Tax=Glycine max RepID=C6ZRU8_SOYBN 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-locus lectin protein kinase family protein 3.84129e-34
Internal
sp_v2.0_unigene19698 SustainPine v2.0 387
AutoFact: Sucrose synthase, putative n=1 Tax=Ricinus communis RepID=B9SAU6_RICCO 0.0
FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Blast2go: sucrose synthase 0.0
Internal
sp_v2.0_unigene19870 SustainPine v2.0 495
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBQ7_RICCO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Putative N-terminus
sp_v2.0_unigene19911 SustainPine v2.0 684
AutoFact: Flavonoid 3-hydroxylase, putative n=1 Tax=Ricinus communis RepID=B9S5P8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flavonoid 3 -monooxygenase-like 0.0
Putative C-terminus
sp_v2.0_unigene19919 SustainPine v2.0 2665
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box rna helicase 0.0
Complete
sp_v2.0_unigene20052 SustainPine v2.0 275
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 5.71491e-20
Internal
sp_v2.0_unigene20102 SustainPine v2.0 714
AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain