Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Integrase, catalytic core

Term: IPR001584  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene79911 SustainPine v2.0 631
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 0.0
Internal
sp_v2.0_unigene80110 SustainPine v2.0 482
AutoFact: galactokinase [Arabidopsis thaliana] sp|Q8VYG2.1|GALAK_ARATH RecName: Full=Galacturonokinase; AltName: Full=D-galacturonic acid-1-P kinase gb|AAL59925.1| putative galactokinase [Arabidopsis thaliana] gb|AAM20366.1| putative galactokinase [Arabidopsis thal 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactokinase 2.12092e-18
N-terminus
sp_v2.0_unigene80267 SustainPine v2.0 405
AutoFact: galactokinase [Arabidopsis thaliana] sp|Q8VYG2.1|GALAK_ARATH RecName: Full=Galacturonokinase; AltName: Full=D-galacturonic acid-1-P kinase gb|AAL59925.1| putative galactokinase [Arabidopsis thaliana] gb|AAM20366.1| putative galactokinase [Arabidopsis thal 2.0e-28
FL-Next: sp=Galacturonokinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ghmp kinase family protein 0.0
Internal
sp_v2.0_unigene80353 SustainPine v2.0 347
AutoFact: rve domain containing protein 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_001479 [Vitis vinifera] 8.02384e-42
Internal
sp_v2.0_unigene80413 SustainPine v2.0 461
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=C0PTP5_PICSI 7.0e-21
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 1.06231e-26
Complete
sp_v2.0_unigene80470 SustainPine v2.0 670
AutoFact: putative cyclin-dependent kinase regulatory subunit [Triticum aestivum] 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene80548 SustainPine v2.0 515
AutoFact: galactokinase [Arabidopsis thaliana] sp|Q8VYG2.1|GALAK_ARATH RecName: Full=Galacturonokinase; AltName: Full=D-galacturonic acid-1-P kinase gb|AAL59925.1| putative galactokinase [Arabidopsis thaliana] gb|AAM20366.1| putative galactokinase [Arabidopsis thal 5.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100793652 4.01705e-07
Putative N-terminus
sp_v2.0_unigene80627 SustainPine v2.0 477
AutoFact: Xyloglucan:xyloglucosyl transferase (Fragment) n=4 Tax=Pseudotsuga RepID=C6FD23_PSEMZ 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xyloglucan:xyloglucosyl transferase 6.25982e-35
Internal
sp_v2.0_unigene80702 SustainPine v2.0 810
AutoFact: pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene80729 SustainPine v2.0 288
AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s19 3.50145e-31
C-terminus
sp_v2.0_unigene80861 SustainPine v2.0 837
AutoFact: Xyloglucan endotransglycosylase n=1 Tax=Annona cherimola RepID=B8XXI5_ANNCH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xyloglucan:xyloglucosyl transferase 0.0
N-terminus
sp_v2.0_unigene80932 SustainPine v2.0 463
AutoFact: galactokinase [Arabidopsis thaliana] sp|Q8VYG2.1|GALAK_ARATH RecName: Full=Galacturonokinase; AltName: Full=D-galacturonic acid-1-P kinase gb|AAL59925.1| putative galactokinase [Arabidopsis thaliana] gb|AAM20366.1| putative galactokinase [Arabidopsis thal 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactokinase 0.0
Putative N-terminus
sp_v2.0_unigene80937 SustainPine v2.0 511
AutoFact: Xyloglucan:xyloglucosyl transferase (Fragment) n=4 Tax=Pseudotsuga RepID=C6FD23_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xyloglucan:xyloglucosyl transferase 0.0
Putative C-terminus
sp_v2.0_unigene81316 SustainPine v2.0 462
AutoFact: Ferritin (Fragment) n=3 Tax=Pseudotsuga RepID=C6F952_PSEMZ 3.0e-36
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 0.0
C-terminus
sp_v2.0_unigene81350 SustainPine v2.0 454
AutoFact: Caffeoyl-CoA-O-methyltransferase (Fragment) n=12 Tax=Pinus RepID=A4FT66_PINPS 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caffeoyl o-methyltransferase 0.0
Putative N-terminus
sp_v2.0_unigene81594 SustainPine v2.0 501
AutoFact: Caffeoyl-CoA O-methyltransferase n=8 Tax=Pinaceae RepID=CAMT_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caffeoyl o-methyltransferase 0.0
Internal
sp_v2.0_unigene81599 SustainPine v2.0 320
AutoFact: Ferritin (Fragment) n=3 Tax=Pseudotsuga RepID=C6F952_PSEMZ 2.0e-26
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 3.47117e-28
C-terminus
sp_v2.0_unigene81836 SustainPine v2.0 275
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 8.54792e-44
Putative C-terminus
sp_v2.0_unigene81928 SustainPine v2.0 609
AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 0.0
Complete
sp_v2.0_unigene81945 SustainPine v2.0 184
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.25143e-30
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain