Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Integrase, catalytic core

Term: IPR001584  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene73737 SustainPine v2.0 427
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrovirus-related pol polyprotein from transposon tnt 1-94 9.85097e-19
Internal
sp_v2.0_unigene73811 SustainPine v2.0 394
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 2.0e-26
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 5.03191e-33
C-terminus
sp_v2.0_unigene73900 SustainPine v2.0 330
AutoFact: Polyprotein (Fragment) n=1 Tax=Hydrangea macrophylla RepID=Q153Y8_HYDMC 5.0e-10
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: ac079131_10 copia-type 3.23891e-12
Internal
sp_v2.0_unigene74019 SustainPine v2.0 422
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 3.0e-32
FL-Next: tr=Integrase; subsp. trichocarpa). 0.0
Blast2go: gag protein 5.86802e-32
Internal
sp_v2.0_unigene74085 SustainPine v2.0 358
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-24
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon ty1-copia subclass 2.00223e-28
Internal
sp_v2.0_unigene74098 SustainPine v2.0 300
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: reverse transcriptase 3.44548e-13
Internal
sp_v2.0_unigene74103 SustainPine v2.0 438
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 7.0e-31
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 9.23952e-36
Internal
sp_v2.0_unigene74177 SustainPine v2.0 390
AutoFact: OSIGBa0101K10.6 protein n=1 Tax=Oryza sativa RepID=Q01MA8_ORYSA 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 4.0216e-26
Putative Complete
sp_v2.0_unigene74215 SustainPine v2.0 443
AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 1.4665e-36
Internal
sp_v2.0_unigene74223 SustainPine v2.0 436
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 9.99967e-42
FL-Next: tr=Putative gag-pol polyprotein; Petunia hybrida (Petunia). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative C-terminus
sp_v2.0_unigene74342 SustainPine v2.0 266
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.21322e-24
Internal
sp_v2.0_unigene74629 SustainPine v2.0 425
AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9T062_RICCO 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cinnamoyl- reductase 1.32871e-36
Internal
sp_v2.0_unigene75180 SustainPine v2.0 371
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 6.0e-29
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 3.58714e-36
Putative C-terminus
sp_v2.0_unigene75252 SustainPine v2.0 327
AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 7.25996e-14
Internal
sp_v2.0_unigene75408 SustainPine v2.0 341
AutoFact: Polyprotein-like n=1 Tax=Solanum chilense RepID=Q9AU17_SOLCI 1.0e-19
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon ty1-copia subclass 1.06434e-22
N-terminus
sp_v2.0_unigene75463 SustainPine v2.0 349
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 7.0e-26
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon unclassified 6.20541e-30
Putative C-terminus
sp_v2.0_unigene75473 SustainPine v2.0 358
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_040966 [Vitis vinifera] 1.65721e-14
Internal
sp_v2.0_unigene75482 SustainPine v2.0 391
AutoFact: [TDBLU] COG5032 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family 1.0e-13
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: transformation transcription domain-associated protein 0.0
Internal
sp_v2.0_unigene75602 SustainPine v2.0 458
AutoFact: rve domain containing protein 1.0e-07
FL-Next: tr=F28H19.8 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein loc100777486 6.62259e-18
C-terminus
sp_v2.0_unigene75605 SustainPine v2.0 364
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 2.43047e-28
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain