Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Integrase, catalytic core

Term: IPR001584  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene72405 SustainPine v2.0 231
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 2.0e-19
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: tir-nbs-lrr type disease resistance protein 1.99041e-25
C-terminus
sp_v2.0_unigene72511 SustainPine v2.0 391
AutoFact: Calcium ion binding protein, putative n=1 Tax=Ricinus communis RepID=B9S836_RICCO 7.0e-20
FL-Next: tr=Calcium ion binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: calcium ion binding 1.33902e-19
Internal
sp_v2.0_unigene72627 SustainPine v2.0 262
AutoFact: Polyprotein n=1 Tax=Zea mays RepID=A5JSC4_MAIZE 8.0e-18
FL-Next: tr=Putative polyprotein; Oryza sativa (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 5.79546e-19
Internal
sp_v2.0_unigene72636 SustainPine v2.0 247
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein n=1 Tax=Medicago truncatula RepID=Q2HW87_MEDTR 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 1.61936e-10
Internal
sp_v2.0_unigene72641 SustainPine v2.0 280
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q5W683_ORYSJ 1.0e-16
FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: uncharacterized protein loc100799454 4.2067e-21
Internal
sp_v2.0_unigene72643 SustainPine v2.0 399
AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein partial 8.25498e-25
Putative Complete
sp_v2.0_unigene73100 SustainPine v2.0 339
AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE 2.0e-29
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 2.72557e-38
Putative N-terminus
sp_v2.0_unigene73151 SustainPine v2.0 397
AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 1.0e-31
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 2.99034e-37
Putative N-terminus
sp_v2.0_unigene73217 SustainPine v2.0 323
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 2.0e-36
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 3.34295e-36
Internal
sp_v2.0_unigene73233 SustainPine v2.0 218
AutoFact: polyprotein [Candida glabrata] 3.0e-18
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: gag-pol polyprotein 1.18877e-21
C-terminus
sp_v2.0_unigene73307 SustainPine v2.0 404
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 6.0e-38
FL-Next: tr=Integrase; Silene latifolia (White campion) (Bladder campion). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene73366 SustainPine v2.0 397
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 8.0e-26
FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Blast2go: retrotransposon unclassified 1.53374e-25
Internal
sp_v2.0_unigene73381 SustainPine v2.0 326
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD4_SILLA 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: gag-pol polyprotein 1.74756e-34
Internal
sp_v2.0_unigene73392 SustainPine v2.0 461
AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 4.03555e-24
Putative C-terminus
sp_v2.0_unigene73457 SustainPine v2.0 194
AutoFact: OSJNBa0085C10.29 protein n=1 Tax=Oryza sativa RepID=Q5JPW2_ORYSA 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 3.44207e-20
Putative Complete
sp_v2.0_unigene73505 SustainPine v2.0 303
AutoFact: RVT_2 domain containing protein 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_004365 [Vitis vinifera] 6.7487e-21
Internal
sp_v2.0_unigene73546 SustainPine v2.0 371
AutoFact: Putative gag-pol polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6UUF6_ORYSJ 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 1.84971e-43
Complete
sp_v2.0_unigene73667 SustainPine v2.0 324
AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.35217e-32
Internal
sp_v2.0_unigene73700 SustainPine v2.0 326
AutoFact: OSJNBb0049I21.5 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XRV6_ORYSJ 3.0e-22
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon ty3-gypsy subclass 4.15575e-22
Putative C-terminus
sp_v2.0_unigene73710 SustainPine v2.0 395
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q10FX2_ORYSJ 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.5685e-16
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain