Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Integrase, catalytic core

Term: IPR001584  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene69110 SustainPine v2.0 644
• AutoFact: Lectin-like receptor kinase 7;3 n=1 Tax=Medicago truncatula RepID=Q6UY58_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Putative C-terminus
sp_v2.0_unigene69253 SustainPine v2.0 336
• AutoFact: reverse transcriptase [Ginkgo biloba] 8.0e-35
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 8.40779e-45
Putative C-terminus
sp_v2.0_unigene69255 SustainPine v2.0 263
• AutoFact: RVT_1 domain containing protein 4.0e-05
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 2.98382e-23
Putative C-terminus
sp_v2.0_unigene69417 SustainPine v2.0 422
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 1.19455e-29
Internal
sp_v2.0_unigene69554 SustainPine v2.0 406
• AutoFact: Carbohydrate oxidase n=1 Tax=Helianthus annuus RepID=Q8SA59_HELAN 1.0e-26
• FL-Next: sp=Reticuline oxidase; Papaver somniferum (Opium poppy). 0.0
• Blast2go: reticuline oxidase-like 3.80288e-33
Internal
sp_v2.0_unigene69625 SustainPine v2.0 544
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: af478370_1gag-pol polyprotein 1.4013e-45
C-terminus
sp_v2.0_unigene69856 SustainPine v2.0 391
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 1.0e-31
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: uncharacterized protein loc100854181 1.83806e-38
Putative N-terminus
sp_v2.0_unigene70351 SustainPine v2.0 392
• AutoFact: [R] COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rnase l inhibitor-like protein 4.32312e-19
C-terminus
sp_v2.0_unigene70391 SustainPine v2.0 498
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon ty1-copia subclass 3.14632e-33
Internal
sp_v2.0_unigene70404 SustainPine v2.0 278
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase family protein 4.60787e-23
Internal
sp_v2.0_unigene70497 SustainPine v2.0 327
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9R919_RICCO 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp binding 3.1127e-41
Internal
sp_v2.0_unigene70577 SustainPine v2.0 302
• AutoFact: GK15001 n=1 Tax=Drosophila willistoni RepID=B4MVS9_DROWI 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrovirus-related pol polyprotein from transposon tnt 1-94 6.34124e-18
Internal
sp_v2.0_unigene70670 SustainPine v2.0 306
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=8 Tax=Oryza sativa RepID=Q2QR60_ORYSJ 3.0e-21
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 8.57647e-25
Internal
sp_v2.0_unigene70722 SustainPine v2.0 328
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 2.1619e-24
C-terminus
sp_v2.0_unigene70729 SustainPine v2.0 430
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 1.25067e-30
Internal
sp_v2.0_unigene70753 SustainPine v2.0 311
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.93998e-20
Internal
sp_v2.0_unigene70851 SustainPine v2.0 163
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVL5_9POAL 7.0e-10
• FL-Next: tr=OSJNBa0014F04.5 protein; Oryza sativa (Rice). 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 2.2056e-12
Internal
sp_v2.0_unigene70934 SustainPine v2.0 359
• AutoFact: Putative polyprotein (Fragment) n=1 Tax=Cicer arietinum RepID=Q949K9_CICAR 3.0e-19
• FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: polyprotein 5.68225e-19
Internal
sp_v2.0_unigene70943 SustainPine v2.0 298
• AutoFact: rve domain containing protein 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 3.98257e-27
Internal
sp_v2.0_unigene70959 SustainPine v2.0 279
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Ginkgo biloba RepID=Q9ARL0_GINBI 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pol protein integrase region 7.74644e-22
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain