Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Integrase, catalytic core

Term: IPR001584  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene67480 SustainPine v2.0 323
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RMI9_RICCO 6.0e-39
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna 1.28505e-38
Internal
sp_v2.0_unigene67787 SustainPine v2.0 322
AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Oryza sativa Japonica Group RepID=Q53KP3_ORYSJ 3.0e-18
FL-Next: tr=OSJNBa0074B10.8 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 3.52891e-21
Internal
sp_v2.0_unigene67862 SustainPine v2.0 283
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100854191 2.09151e-18
Putative C-terminus
sp_v2.0_unigene67868 SustainPine v2.0 289
AutoFact: pfam13001, Ecm29, Proteasome stabiliser 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: proteasome-associated protein ecm29 homolog 1.05053e-30
Internal
sp_v2.0_unigene67950 SustainPine v2.0 450
AutoFact: Protein argonaute 1A n=3 Tax=Oryza sativa RepID=AGO1A_ORYSJ 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein argonaute 0.0
Internal
sp_v2.0_unigene68182 SustainPine v2.0 381
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 4.18805e-33
Internal
sp_v2.0_unigene68267 SustainPine v2.0 300
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y0A9_ORYSJ 3.0e-17
FL-Next: tr=Putative retroelement; Oryza sativa (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 1.66354e-20
Internal
sp_v2.0_unigene68297 SustainPine v2.0 340
AutoFact: Detoxifying efflux carrier 35 n=5 Tax=Arabidopsis RepID=F4JTB2_ARATH 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: detoxifying efflux carrier 35 9.09795e-26
C-terminus
sp_v2.0_unigene68432 SustainPine v2.0 371
AutoFact: [TDBLU] COG5032 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family 5.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: transformation transcription domain-associated protein 1.62622e-39
Internal
sp_v2.0_unigene68481 SustainPine v2.0 304
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.62624e-24
Internal
sp_v2.0_unigene68621 SustainPine v2.0 438
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 1.0e-19
FL-Next: tr=Integrase core domain containing protein; Asparagus officinalis (Garden asparagus). 0.0
Blast2go: retrotransposable element tf2 155 kda protein type 1-like 2.44767e-22
Internal
sp_v2.0_unigene68657 SustainPine v2.0 289
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q5W6T2_ORYSJ 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.76222e-20
Internal
sp_v2.0_unigene68725 SustainPine v2.0 458
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene68769 SustainPine v2.0 411
AutoFact: Putative gag-pol polyprotein, identical n=2 Tax=Solanum demissum RepID=Q5NRP4_SOLDE 2.0e-21
FL-Next: tr=Putative gag-pol polyprotein, identical; Solanum demissum (Wild potato). 0.0
Blast2go: uncharacterized protein partial 3.32395e-21
Internal
sp_v2.0_unigene68789 SustainPine v2.0 380
AutoFact: Adenylate kinase 1, putative n=1 Tax=Ricinus communis RepID=B9RMJ0_RICCO 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adenylate kinase b 1.31077e-22
Putative N-terminus
sp_v2.0_unigene68842 SustainPine v2.0 385
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 4.71458e-36
Internal
sp_v2.0_unigene68968 SustainPine v2.0 417
AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=2 Tax=Oryza sativa Japonica Group RepID=Q53KQ8_ORYSJ 4.0e-22
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy sub-class; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 2.93551e-25
Internal
sp_v2.0_unigene69007 SustainPine v2.0 477
AutoFact: putative lectin-like protein kinase [Oryza sativa Japonica Group] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 1.28404e-28
Internal
sp_v2.0_unigene69011 SustainPine v2.0 469
AutoFact: NXRV091_F10_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV091_F10 5' similar to Arabidopsis thaliana sequence At1g37060 Athila retroelment ORF 1, putative see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100855032 5.88545e-44
Putative C-terminus
sp_v2.0_unigene69025 SustainPine v2.0 427
AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome partial 0.0
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain