Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Integrase, catalytic core

Term: IPR001584  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene62988 SustainPine v2.0 669
AutoFact: Beta-galactosidase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SWF1_VITVI 0.0
FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-galactosidase 10 0.0
Internal
sp_v2.0_unigene63114 SustainPine v2.0 487
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: ac090485_10 retroelement 0.0
N-terminus
sp_v2.0_unigene63283 SustainPine v2.0 496
AutoFact: Transparent testa 12 protein n=1 Tax=Zea mays RepID=B6TBH9_MAIZE 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 12 protein 0.0
N-terminus
sp_v2.0_unigene63440 SustainPine v2.0 541
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 3.50829e-41
Putative N-terminus
sp_v2.0_unigene63652 SustainPine v2.0 398
AutoFact: Heat shock protein 90 kDa (Fragment) n=2 Tax=Pseudotsuga RepID=C6F908_PSEMZ 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 90 kda 0.0
C-terminus
sp_v2.0_unigene63753 SustainPine v2.0 807
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transparent testa 0.0
C-terminus
sp_v2.0_unigene63830 SustainPine v2.0 555
AutoFact: Adenylate kinase B n=8 Tax=Magnoliophyta RepID=KAD2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adenylate kinase b 0.0
N-terminus
sp_v2.0_unigene63886 SustainPine v2.0 725
AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera] 0.0
Internal
sp_v2.0_unigene64089 SustainPine v2.0 713
AutoFact: cytochrome P450 [Pyrus communis] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene64252 SustainPine v2.0 506
AutoFact: Allyl alcohol dehydrogenase n=1 Tax=Nicotiana tabacum RepID=Q9SLN8_TOBAC 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nadp-dependent alkenal double bond reductase p2 0.0
N-terminus
sp_v2.0_unigene64342 SustainPine v2.0 459
AutoFact: Retrotransposon protein, putative, unclassified n=16 Tax=Oryza RepID=Q2R0G5_ORYSJ 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100852570 1.48511e-32
C-terminus
sp_v2.0_unigene64657 SustainPine v2.0 500
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 0.0
Internal
sp_v2.0_unigene64766 SustainPine v2.0 526
AutoFact: Dihydroflavonal-4-reductase 2 n=2 Tax=Medicago truncatula RepID=Q6TQT0_MEDTR 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydroflavonol 4-reductase 8.68805e-44
Putative N-terminus
sp_v2.0_unigene64835 SustainPine v2.0 448
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: disease resistance protein 1.14123e-36
C-terminus
sp_v2.0_unigene64898 SustainPine v2.0 345
AutoFact: CCAAT-box transcription factor complex WHAP2 [Triticum aestivum] 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.27134e-36
Internal
sp_v2.0_unigene65131 SustainPine v2.0 288
AutoFact: RVT_2 domain containing protein 4.0e-26
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_028342 [Vitis vinifera] 1.91795e-25
Internal
sp_v2.0_unigene65254 SustainPine v2.0 377
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 1.0e-21
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: copia partial 1.23664e-24
Putative C-terminus
sp_v2.0_unigene65259 SustainPine v2.0 461
AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Blast2go: gag-pol polyprotein 7.86207e-38
Internal
sp_v2.0_unigene65376 SustainPine v2.0 297
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10NE5_ORYSJ 1.0e-26
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 1.03321e-32
Putative C-terminus
sp_v2.0_unigene65420 SustainPine v2.0 343
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100259900 7.82995e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain