Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: mRNA metabolic process

Term: GO:0016071  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene21112 SustainPine v2.0 2325
AutoFact: PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein, isoform 1 [Ornithorhynchus anatinus] 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein q 0.0
Complete
sp_v2.0_unigene79523 SustainPine v2.0 800
AutoFact: Ubiquitin n=2 Tax=Dictyosteliida RepID=D3AVZ4_POLPA 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 3.02921e-31
Complete
sp_v2.0_unigene80361 SustainPine v2.0 383
AutoFact: Polyubiquitin 9 n=1 Tax=Arabidopsis thaliana RepID=UBQ9_ARATH 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 9 8.75533e-30
C-terminus
sp_v2.0_unigene83928 SustainPine v2.0 658
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-24
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiqutin 1 4.70528e-33
Putative C-terminus
sp_v2.0_unigene83942 SustainPine v2.0 675
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Putative Complete
sp_v2.0_unigene83946 SustainPine v2.0 399
AutoFact: Ubiquitin n=2 Tax=Dictyosteliida RepID=D3AVZ4_POLPA 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 8.40779e-45
N-terminus
sp_v2.0_unigene83956 SustainPine v2.0 749
AutoFact: polyubiquitin UbiD/Ubi4 [Aspergillus fumigatus Af293] gb|EAL89753.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus Af293] gb|EDP50407.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus A1163] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin c variant 2 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain