Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: chloroplast-nucleus signaling pathway

Term: GO:0010019  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1864 SustainPine v2.0 2066
AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
sp_v2.0_unigene2219 SustainPine v2.0 1242
AutoFact: Heme oxygenase 1 n=2 Tax=Pinaceae RepID=Q94FW5_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heme oxygenase 1 protein 2 0.0
Complete
sp_v2.0_unigene8361 SustainPine v2.0 1858
AutoFact: Heme oxygenase 1 n=2 Tax=Pinaceae RepID=Q94FW5_PINTA 0.0
FL-Next: tr=Heme oxygenase 1; Pinus taeda (Loblolly pine). 0.0
Blast2go: heme oxygenase 1 protein 2 0.0
Complete
sp_v2.0_unigene25858 SustainPine v2.0 780
AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 4.67473e-42
Putative N-terminus
sp_v2.0_unigene35541 SustainPine v2.0 401
AutoFact: Heme oxygenase 1 n=2 Tax=Pinaceae RepID=Q94FW5_PINTA 9.0e-16
FL-Next: tr=Heme oxygenase 1; Pinus taeda (Loblolly pine). 0.0
Blast2go: heme oxygenase 1 1.9272e-18
Putative C-terminus
sp_v2.0_unigene36324 SustainPine v2.0 584
AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene71436 SustainPine v2.0 300
AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 3.0e-07
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 5.66989e-10
Internal
sp_v2.0_unigene85679 SustainPine v2.0 472
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetrapyrrole-binding chloroplastic-like 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain