Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: SCF ubiquitin ligase complex

Term: GO:0019005  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene47683 SustainPine v2.0 452
• AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box protein gid2-like 0.0
N-terminus
sp_v2.0_unigene60363 SustainPine v2.0 525
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Lupinus luteus RepID=CYPH_LUPLU 2.0e-36
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus taeda (Loblolly pine). 0.0
• Blast2go: peptidylprolyl isomerase roc1 2.91383e-36
C-terminus
sp_v2.0_unigene65792 SustainPine v2.0 410
• AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box protein gid2-like 1.67054e-19
Putative N-terminus
sp_v2.0_unigene67793 SustainPine v2.0 324
• AutoFact: cullin 3-like protein [Arabidopsis thaliana] 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cullin 3 0.0
Internal
sp_v2.0_unigene70662 SustainPine v2.0 239
• AutoFact: putative ring-box Roc1/Rbx1/Hrt1 protein [Olimarabidopsis pumila] 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-box protein 2.41157e-25
C-terminus
sp_v2.0_unigene77029 SustainPine v2.0 826
• AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box protein gid2-like 0.0
Complete
sp_v2.0_unigene83138 SustainPine v2.0 544
• AutoFact: RING-box protein 1a n=7 Tax=rosids RepID=RBX1A_ARATH 8.99634e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-box protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain