Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: base-excision repair

Term: GO:0006284  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3927 SustainPine v2.0 1184
AutoFact: 8-oxoguanine DNA glycosylase [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: n-glycosylase dna lyase 0.0
Putative Complete
sp_v2.0_unigene4400 SustainPine v2.0 376
AutoFact: Unassigned protein
FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional activator demeter-like 0.0
Internal
sp_v2.0_unigene4576 SustainPine v2.0 873
AutoFact: Uracil-DNA glycosylase n=1 Tax=Picea sitchensis RepID=D5ADR8_PICSI 2.0e-22
FL-Next: sp=Uracil-DNA glycosylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uracil-dna glycosylase 4.98033e-25
C-terminus
sp_v2.0_unigene5484 SustainPine v2.0 827
AutoFact: 8-oxoguanine DNA glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S2W7_RICCO 2.0e-24
FL-Next: tr=8-oxoguanine DNA glycosylase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: n-glycosylase dna lyase 7.42815e-29
Putative C-terminus
sp_v2.0_unigene8059 SustainPine v2.0 1345
AutoFact: DNA-3-methyladenine glycosylase II [Arabidopsis thaliana] emb|CAB42917.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana] dbj|BAC43662.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana] gb|AAO63339.1| At3g50880 [Arabidopsis 0.0
FL-Next: tr=HhH-GPD base excision DNA repair family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: gpd base excision dna repair family protein 0.0
Complete
sp_v2.0_unigene10517 SustainPine v2.0 606
AutoFact: Endonuclease III, putative n=1 Tax=Ricinus communis RepID=B9T798_RICCO 1.4013e-45
FL-Next: tr=Endonuclease III, putative; Ricinus communis (Castor bean). 0.0
Blast2go: endonuclease iii 0.0
Internal
sp_v2.0_unigene11407 SustainPine v2.0 999
AutoFact: Uracil-DNA glycosylase n=1 Tax=Picea sitchensis RepID=D5ADR8_PICSI 0.0
FL-Next: sp=Uracil-DNA glycosylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uracil-dna glycosylase 0.0
N-terminus
sp_v2.0_unigene13208 SustainPine v2.0 569
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 2.0e-34
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Blast2go: transcriptional activator demeter-like 4.09832e-39
Internal
sp_v2.0_unigene17858 SustainPine v2.0 736
AutoFact: endonuclease III [Arabidopsis thaliana] gb|AAD26474.2| putative endonuclease [Arabidopsis thaliana] gb|AEC08549.1| endonuclease III [Arabidopsis thaliana] 3.0e-34
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: endonuclease iii 1.4013e-44
C-terminus
sp_v2.0_unigene33242 SustainPine v2.0 698
AutoFact: endonuclease III [Arabidopsis thaliana] gb|AAD26474.2| putative endonuclease [Arabidopsis thaliana] gb|AEC08549.1| endonuclease III [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: endonuclease iii 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain