Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene80242 SustainPine v2.0 601
• AutoFact: Histone H2AX n=10 Tax=rosids RepID=H2AX_CICAR 3.0e-13
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h2a 1.90068e-14
Complete
sp_v2.0_unigene80361 SustainPine v2.0 383
• AutoFact: Polyubiquitin 9 n=1 Tax=Arabidopsis thaliana RepID=UBQ9_ARATH 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polyubiquitin 9 8.75533e-30
C-terminus
sp_v2.0_unigene80402 SustainPine v2.0 403
• AutoFact: 60 kDa chaperonin beta subunit n=4 Tax=Poaceae RepID=Q6ZFJ9_ORYSJ 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tcp-1 cpn60 chaperonin family protein 1.16119e-15
Internal
sp_v2.0_unigene80414 SustainPine v2.0 407
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 7.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h2b like protein 0.0
C-terminus
sp_v2.0_unigene80453 SustainPine v2.0 577
• AutoFact: Porin/voltage-dependent anion-selective channel protein n=1 Tax=Populus trichocarpa RepID=B9H6N6_POPTR 6.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: voltage-dependent anion-selective 8.44142e-42
N-terminus
sp_v2.0_unigene80538 SustainPine v2.0 825
• AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 0.0
N-terminus
sp_v2.0_unigene80559 SustainPine v2.0 764
• AutoFact: 60S ribosomal protein L35-4 n=1 Tax=Arabidopsis thaliana RepID=F4KDR2_ARATH 8.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l35 2.09849e-32
Complete
sp_v2.0_unigene80729 SustainPine v2.0 288
• AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei 5.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s19 3.50145e-31
C-terminus
sp_v2.0_unigene80768 SustainPine v2.0 473
• AutoFact: ADP,ATP carrier protein, putative n=1 Tax=Ricinus communis RepID=B9RVW7_RICCO 6.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adenylate translocator 7.80804e-42
C-terminus
sp_v2.0_unigene80784 SustainPine v2.0 417
• AutoFact: PREDICTED: 40S ribosomal protein S6-like isoform 2 n=1 Tax=Monodelphis domestica RepID=UPI00020F7055 3.0e-31
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein s6 1.11063e-34
N-terminus
sp_v2.0_unigene80801 SustainPine v2.0 443
• AutoFact: histone H4 [Hyacinthus orientalis] 7.0e-17
• FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: histone h4 1.22608e-17
Putative Complete
sp_v2.0_unigene80854 SustainPine v2.0 427
• AutoFact: 60S ribosomal protein L3-1 n=7 Tax=Brassicaceae RepID=RL31_ARATH 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l3-1 1.87644e-30
Internal
sp_v2.0_unigene80865 SustainPine v2.0 419
• AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
• FL-Next: sp=Elongation factor 2; Beta vulgaris (Sugar beet). 0.0
• Blast2go: elongation factor 0.0
Internal
sp_v2.0_unigene80914 SustainPine v2.0 937
• AutoFact: 40S ribosomal protein S3a-2 [Arabidopsis thaliana] sp|Q42262.3|RS3A2_ARATH RecName: Full=40S ribosomal protein S3a-2 emb|CAA04689.1| Putative S-phase-specific ribosomal protein [Arabidopsis thaliana] emb|CAA18846.1| Putative S-phase-specific ribosomal pro 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: s-phase-specific ribosomal protein 0.0
Putative Complete
sp_v2.0_unigene81031 SustainPine v2.0 231
• AutoFact: RecName: Full=60S ribosomal protein L4; AltName: Full=L1 gb|AAD32206.1|AF134732_1 60S ribosomal protein L1 [Prunus armeniaca] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l4-1 1.54804e-17
Internal
sp_v2.0_unigene81074 SustainPine v2.0 354
• AutoFact: 40S ribosomal protein S13, putative n=1 Tax=Solanum demissum RepID=Q6L4B2_SOLDE 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s13 0.0
N-terminus
sp_v2.0_unigene81130 SustainPine v2.0 755
• AutoFact: 60S ribosomal protein L11-1 n=51 Tax=Embryophyta RepID=RL111_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l11 0.0
C-terminus
sp_v2.0_unigene81295 SustainPine v2.0 504
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 3.0e-21
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h2a 6.23127e-21
Putative Complete
sp_v2.0_unigene81339 SustainPine v2.0 765
• AutoFact: Putative glycine-rich protein n=1 Tax=Picea glauca RepID=Q3HRT2_PICGL 5.0e-20
• FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: protein 2.64476e-24
Putative Complete
sp_v2.0_unigene81547 SustainPine v2.0 249
• AutoFact: Eukaryotic initiation factor 4A-like protein n=2 Tax=Chlamydomonadales RepID=A8IP17_CHLRE 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: translational initiation factor 4a-1 2.69929e-25
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain