Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene78711 SustainPine v2.0 461
• AutoFact: RecName: Full=Glycine-rich RNA-binding protein 10 emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glycine-rich rna-binding protein 8 3.81263e-21
Putative N-terminus
sp_v2.0_unigene78959 SustainPine v2.0 230
• AutoFact: Rac-like GTP binding protein n=1 Tax=Picea mariana RepID=O65062_PICMA 3.0e-19
• FL-Next: tr=Rac-like GTP binding protein; Picea mariana (Black spruce) (Abies mariana). 0.0
• Blast2go: rho family gtpase 1.05864e-24
Putative C-terminus
sp_v2.0_unigene79038 SustainPine v2.0 505
• AutoFact: putative splicing factor [Oryza sativa Japonica Group] gb|ABF96207.1| RNA recognition motif family protein, expressed [Oryza sativa Japonica Group] gb|EEC75348.1| hypothetical protein OsI_11773 [Oryza sativa Indica Group] gb|EEE59134.1| hypothetical prote 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif family expressed 3.5424e-24
Putative N-terminus
sp_v2.0_unigene79054 SustainPine v2.0 379
• AutoFact: 40S ribosomal protein S19 n=1 Tax=Elaeis guineensis RepID=B3TLL5_ELAGV 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s19 5.23111e-39
N-terminus
sp_v2.0_unigene79075 SustainPine v2.0 414
• AutoFact: 3-ketoacyl-CoA thiolase 2 [Arabidopsis thaliana] sp|Q56WD9.2|THIK2_ARATH RecName: Full=3-ketoacyl-CoA thiolase 2, peroxisomal; AltName: Full=Acetyl-CoA acyltransferase 2; AltName: Full=Beta-ketothiolase 2; AltName: Full=Peroxisomal 3-oxoacyl-CoA thiolase 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3-ketoacyl- thiolase 0.0
Internal
sp_v2.0_unigene79089 SustainPine v2.0 527
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h2b 1.93519e-42
Putative Complete
sp_v2.0_unigene79211 SustainPine v2.0 266
• AutoFact: 40S ribosomal protein S15 n=4 Tax=Spermatophyta RepID=RS15_ELAOL 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.28933e-16
C-terminus
sp_v2.0_unigene79295 SustainPine v2.0 413
• AutoFact: Histone H2A n=4 Tax=Chlorella variabilis RepID=E1ZCE3_9CHLO 2.0e-26
• FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
• Blast2go: histone h2a 9.47383e-34
N-terminus
sp_v2.0_unigene79349 SustainPine v2.0 409
• AutoFact: putative ribosomal protein [Capsicum annuum] 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pointed first leaf 0.0
Putative Complete
sp_v2.0_unigene79373 SustainPine v2.0 350
• AutoFact: ribosomal protein S15 [Pisum sativum] 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.51118e-17
C-terminus
sp_v2.0_unigene79472 SustainPine v2.0 694
• AutoFact: Ribosomal protein L5, putative n=1 Tax=Ricinus communis RepID=B9SEY9_RICCO 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein 1.90149e-09
N-terminus
sp_v2.0_unigene79503 SustainPine v2.0 556
• AutoFact: Putative heat shock protein 90 n=1 Tax=Arabidopsis thaliana RepID=Q8GRU8_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock protein 90 0.0
C-terminus
sp_v2.0_unigene79552 SustainPine v2.0 727
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h2b 0.0
Complete
sp_v2.0_unigene79613 SustainPine v2.0 300
• AutoFact: 40S ribosomal protein S19-1 n=8 Tax=Arabidopsis RepID=RS191_ARATH 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s19 0.0
C-terminus
sp_v2.0_unigene79668 SustainPine v2.0 882
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene79795 SustainPine v2.0 566
• AutoFact: Heat shock cognate 70 kDa protein n=7 Tax=Magnoliophyta RepID=HSP7C_PETHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock protein 70 0.0
Internal
sp_v2.0_unigene79923 SustainPine v2.0 402
• AutoFact: Translation initiation factor IF6 [Arabidopsis thaliana] sp|Q9M060.1|IF62_ARATH RecName: Full=Eukaryotic translation initiation factor 6-2; Short=AteIF-6;2 emb|CAB81587.1| eukaryotic translation initiation factor 6 (EIF-6)-like protein [Arabidopsis thalia 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 6 1.04765e-32
N-terminus
sp_v2.0_unigene79932 SustainPine v2.0 254
• AutoFact: ATP synthase gamma chain n=1 Tax=Picea sitchensis RepID=A9NLA3_PICSI 9.0e-21
• FL-Next: sp=ATP synthase gamma chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mitochondrial f1- gamma subunit 2.15614e-25
Internal
sp_v2.0_unigene79945 SustainPine v2.0 360
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pointed first leaf 0.0
Putative Complete
sp_v2.0_unigene80193 SustainPine v2.0 569
• AutoFact: PREDICTED: 40S ribosomal protein S14-like n=1 Tax=Nomascus leucogenys RepID=UPI00020AD71F 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s14 1.03528e-41
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain