Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene71819 SustainPine v2.0 331
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40-repeat protein 4.06377e-44
Internal
sp_v2.0_unigene75000 SustainPine v2.0 326
AutoFact: 40S ribosomal protein S8 n=4 Tax=Picea sitchensis RepID=A9NNT7_PICSI 7.0e-21
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s8-like 5.06435e-26
Internal
sp_v2.0_unigene76811 SustainPine v2.0 484
AutoFact: Histone H2A n=2 Tax=Magnoliophyta RepID=B9REZ0_RICCO 8.0e-11
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2a 2.90525e-13
N-terminus
sp_v2.0_unigene76828 SustainPine v2.0 844
AutoFact: small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] ref|NP_973710.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] ref|NP_001078331.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] emb|CAB83134.1| small nuclear ribonucleoprot 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small nuclear ribonucleo protein 0.0
Complete
sp_v2.0_unigene76953 SustainPine v2.0 760
AutoFact: 60 kDa chaperonin beta subunit n=4 Tax=Poaceae RepID=Q6ZFJ9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ru large subunit-binding protein subunit chloroplastic-like 0.0
Internal
sp_v2.0_unigene76964 SustainPine v2.0 544
AutoFact: putative ATP/GTP binding protein [Ananas comosus] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp gtp binding protein 0.0
N-terminus
sp_v2.0_unigene76972 SustainPine v2.0 640
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Complete
sp_v2.0_unigene77031 SustainPine v2.0 496
AutoFact: Rac-type small GTP-binding protein n=1 Tax=Triticum aestivum RepID=D3YE94_WHEAT 5.99994e-41
FL-Next: tr=Rac-like GTP binding protein; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: rac-like gtp-binding protein arac4 0.0
Putative N-terminus
sp_v2.0_unigene77134 SustainPine v2.0 427
AutoFact: Histone H2B.4 n=7 Tax=Arabidopsis RepID=H2B4_ARATH 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
sp_v2.0_unigene77235 SustainPine v2.0 644
AutoFact: 3-ketoacyl-CoA thiolase [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- thiolase 0.0
C-terminus
sp_v2.0_unigene77357 SustainPine v2.0 516
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 8.00001e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
sp_v2.0_unigene77442 SustainPine v2.0 428
AutoFact: multiprotein-bridging factor 1c [Arabidopsis thaliana] sp|Q9LV58.1|MBF1C_ARATH RecName: Full=Multiprotein-bridging factor 1c dbj|BAB01997.1| ethylene-responsive transcriptional coactivator-like protein [Arabidopsis thaliana] gb|AAO44027.1| At3g24500 [Arab 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transciptional coactivator-like protein 2.02721e-25
N-terminus
sp_v2.0_unigene77553 SustainPine v2.0 458
AutoFact: Cell division control protein 48 homolog D n=25 Tax=Magnoliophyta RepID=CD48D_ARATH 2.0e-10
FL-Next: sp=Cell division cycle protein 48 homolog; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: cell division cycle protein 48 homolog 1.1276e-13
Putative N-terminus
sp_v2.0_unigene77746 SustainPine v2.0 164
AutoFact: Fibrillarin (Fragment) n=1 Tax=Picea mariana RepID=Q7G147_PICMA 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.26944e-17
Putative C-terminus
sp_v2.0_unigene78048 SustainPine v2.0 416
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine endopeptidase 1.74108e-38
Putative C-terminus
sp_v2.0_unigene78206 SustainPine v2.0 289
AutoFact: pfam04427, Brix, Brix domain 6.0e-10
FL-Next: sp=Ribosome production factor 2 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribosome production factor 2 homolog 8.83399e-32
Internal
sp_v2.0_unigene78499 SustainPine v2.0 951
AutoFact: S-adenosylmethionine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIR8_VITVI 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosyl methionine synthetase 0.0
C-terminus
sp_v2.0_unigene78551 SustainPine v2.0 809
AutoFact: L3 Ribosomal protein n=1 Tax=Medicago sativa subsp. x varia RepID=Q9SBR8_MEDSV 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l3-1 0.0
Internal
sp_v2.0_unigene78642 SustainPine v2.0 506
AutoFact: U2 small nuclear ribonucleoprotein A n=1 Tax=Gossypium hirsutum RepID=D6N3G9_GOSHI 1.0e-25
FL-Next: sp=U2 small nuclear ribonucleoprotein A'; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: u2 small nuclear ribonucleoprotein a 9.99278e-31
N-terminus
sp_v2.0_unigene78681 SustainPine v2.0 457
AutoFact: RecName: Full=Phosphoenolpyruvate carboxykinase [ATP] 1 gb|AAA79122.1| phosphoenolpyruvate carboxykinase [Urochloa panicoides] 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoenolpyruvate carboxykinase 8.40779e-45
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain