Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene61476 SustainPine v2.0 1130
• AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 2.0e-32
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h2a 7.15195e-41
Complete
sp_v2.0_unigene61481 SustainPine v2.0 963
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pointed first leaf 0.0
Complete
sp_v2.0_unigene61724 SustainPine v2.0 557
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h2b like protein 3.76597e-25
C-terminus
sp_v2.0_unigene61795 SustainPine v2.0 1144
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fructose-bisphosphate aldolase 0.0
Putative Complete
sp_v2.0_unigene61813 SustainPine v2.0 1388
• AutoFact: 3-ketoacyl-CoA thiolase B [Mangifera indica] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3-ketoacyl- thiolase 0.0
N-terminus
sp_v2.0_unigene61865 SustainPine v2.0 786
• AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine endopeptidase 2.92376e-33
Putative C-terminus
sp_v2.0_unigene62121 SustainPine v2.0 417
• AutoFact: PREDICTED: histone H2A type 1-A-like n=2 Tax=Sus scrofa RepID=UPI0001E87492 2.0e-38
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene62323 SustainPine v2.0 634
• AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s30 5.26186e-27
Complete
sp_v2.0_unigene62337 SustainPine v2.0 1071
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: large subunit ribosomal protein l24e 0.0
Complete
sp_v2.0_unigene62407 SustainPine v2.0 504
• AutoFact: ribosome biogenesis regulatory protein-like protein [Arabidopsis thaliana] sp|Q9SH88.2|RRS1_ARATH RecName: Full=Ribosome biogenesis regulatory protein homolog dbj|BAE98464.1| hypothetical protein [Arabidopsis thaliana] gb|AEC09475.1| ribosome biogenesis r 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosome biogenesis regulatory protein 9.80909e-45
N-terminus
sp_v2.0_unigene62413 SustainPine v2.0 725
• AutoFact: Rac-like GTP-binding protein RAC2 n=5 Tax=rosids RepID=RAC2_LOTJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rop-family small gtpase 0.0
Complete
sp_v2.0_unigene62708 SustainPine v2.0 774
• AutoFact: Cinnamoyl-CoA reductase n=3 Tax=Pinaceae RepID=B3VKE9_9CONI 0.0
• FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
• Blast2go: cinnamoyl reductase 0.0
Putative N-terminus
sp_v2.0_unigene63008 SustainPine v2.0 521
• AutoFact: snRNP core protein SMD3 [Arabidopsis thaliana] gb|AAF16670.1|AC012394_19 putative small nuclear ribonucleoprotein Sm D3; 79504-78381 [Arabidopsis thaliana] gb|AAF17631.1|AC009978_7 T23E18.23 [Arabidopsis thaliana] gb|AAK55732.1|AF380651_1 At1g76300/F15M4_ 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small nuclear ribonucleoprotein sm d3 5.94151e-43
N-terminus
sp_v2.0_unigene63260 SustainPine v2.0 453
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pointed first leaf 0.0
Complete
sp_v2.0_unigene63480 SustainPine v2.0 375
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 6.00036e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pointed first leaf 0.0
Putative Complete
sp_v2.0_unigene63593 SustainPine v2.0 451
• AutoFact: 40S ribosomal protein S18 n=22 Tax=Embryophyta RepID=RS18_ARATH 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pointed first leaf 5.60519e-45
Complete
sp_v2.0_unigene63702 SustainPine v2.0 822
• AutoFact: Mitochondrial F0 ATP synthase D chain n=1 Tax=Elaeis guineensis RepID=B3TLP5_ELAGV 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp synthase subunit d 0.0
Putative Complete
sp_v2.0_unigene63765 SustainPine v2.0 498
• AutoFact: Inward rectifying potassium channel n=1 Tax=Cucumis melo RepID=Q0R4Q4_CUCME 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: inward rectifying potassium channel 2.38292e-19
Internal
sp_v2.0_unigene63814 SustainPine v2.0 607
• AutoFact: Rac-like GTP binding protein n=1 Tax=Picea mariana RepID=O65062_PICMA 0.0
• FL-Next: tr=Rac-like GTP binding protein; Picea mariana (Black spruce) (Abies mariana). 0.0
• Blast2go: rop-family small gtpase 0.0
Putative Complete
sp_v2.0_unigene63871 SustainPine v2.0 673
• AutoFact: Small nuclear ribonucleoprotein-associated protein, putative n=2 Tax=Ricinus communis RepID=B9SV77_RICCO 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: small nuclear ribonucleoprotein associated protein b 9.38348e-36
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain