Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene27192 SustainPine v2.0 517
• AutoFact: CDC14 cell division cycle 14 homolog A isoform 2 [Rattus norvegicus] gb|AAI61876.1| Cdc14a protein [Rattus norvegicus] 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: cdc14 cell division cycle 14 homolog a ( cerevisiae) 0.0
Internal
sp_v2.0_unigene27282 SustainPine v2.0 2941
• AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_VIGRR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 7-like 0.0
Putative C-terminus
sp_v2.0_unigene27661 SustainPine v2.0 694
• AutoFact: histone H4 [Hyacinthus orientalis] 2.99878e-43
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h4 0.0
Putative Complete
sp_v2.0_unigene27746 SustainPine v2.0 421
• AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s30 3.54449e-19
Complete
sp_v2.0_unigene27762 SustainPine v2.0 926
• AutoFact: DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana] ref|NP_568244.2| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana] sp|Q9LFN6.2|RH56_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 56 sp|Q56XG6.3|RH15_ARATH RecName: Full=D 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 56 1.93803e-27
Putative N-terminus
sp_v2.0_unigene27853 SustainPine v2.0 1709
• AutoFact: RNA polymerase I subunit 43 [Arabidopsis thaliana] gb|AAK62414.1|AF386969_1 RNA polymerase subunit (isoform B) [Arabidopsis thaliana] gb|AAB00529.1| RNA polymerase subunit [Arabidopsis thaliana] gb|AAB71974.1| RNA polymerase subunit (isoform B) [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: rna polymerase subunit 0.0
Complete
sp_v2.0_unigene27948 SustainPine v2.0 1176
• AutoFact: ribosomal protein L32 [Medicago sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein 0.0
Complete
sp_v2.0_unigene28011 SustainPine v2.0 2251
• AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene28118 SustainPine v2.0 714
• AutoFact: histone H4 [Hyacinthus orientalis] 8.0e-38
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene28124 SustainPine v2.0 730
• AutoFact: 60S ribosomal protein L32-1 [Arabidopsis thaliana] sp|P49211.2|RL321_ARATH RecName: Full=60S ribosomal protein L32-1 emb|CAB53651.1| ribosomal protein L32-like protein [Arabidopsis thaliana] emb|CAB78812.1| ribosomal protein L32-like protein [Arabidopsis 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l32 0.0
Complete
sp_v2.0_unigene28169 SustainPine v2.0 1255
• AutoFact: ribosomal protein L7Ae-like [Brassica rapa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene28307 SustainPine v2.0 3044
• AutoFact: DEAD BOX RNA helicase RH15-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene28397 SustainPine v2.0 997
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
• FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
• Blast2go: histone h2b 0.0
Complete
sp_v2.0_unigene28738 SustainPine v2.0 945
• AutoFact: Guanylate-binding protein [Arabidopsis thaliana] gb|AED95334.1| Guanylate-binding protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene28865 SustainPine v2.0 469
• AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0
• FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: u5 small nuclear ribonucleoprotein helicase 0.0
Internal
sp_v2.0_unigene28961 SustainPine v2.0 771
• AutoFact: PREDICTED: similar to germinal histone H4 gene n=1 Tax=Canis lupus familiaris RepID=UPI00005A582F 0.0
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h4 0.0
Putative Complete
sp_v2.0_unigene29111 SustainPine v2.0 857
• AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u5 small nuclear ribonucleoprotein helicase 0.0
C-terminus
sp_v2.0_unigene29386 SustainPine v2.0 1353
• AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: at1g14850-like protein 0.0
C-terminus
sp_v2.0_unigene29574 SustainPine v2.0 821
• AutoFact: 40S ribosomal protein S20-1 n=12 Tax=rosids RepID=RS201_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s20 0.0
Complete
sp_v2.0_unigene29625 SustainPine v2.0 939
• AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0
• FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain