Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene20830 SustainPine v2.0 936
AutoFact: multiprotein-bridging factor 1c [Arabidopsis thaliana] sp|Q9LV58.1|MBF1C_ARATH RecName: Full=Multiprotein-bridging factor 1c dbj|BAB01997.1| ethylene-responsive transcriptional coactivator-like protein [Arabidopsis thaliana] gb|AAO44027.1| At3g24500 [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transciptional coactivator-like protein 0.0
Complete
sp_v2.0_unigene20950 SustainPine v2.0 1738
AutoFact: end binding protein 1C [Arabidopsis thaliana] dbj|BAB09646.1| unnamed protein product [Arabidopsis thaliana] gb|AAM65311.1| microtubule-associated protein EB1-like protein [Arabidopsis thaliana] dbj|BAD43258.1| unknown protein [Arabidopsis thaliana] gb|AB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: microtubule-associated protein rp eb family member 1-like 0.0
Complete
sp_v2.0_unigene21102 SustainPine v2.0 752
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S0D0_RICCO 3.0e-27
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: wd repeat-containing protein 3-like 4.20189e-30
C-terminus
sp_v2.0_unigene21170 SustainPine v2.0 425
AutoFact: putative ATP/GTP binding protein [Ananas comosus] 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
sp_v2.0_unigene21434 SustainPine v2.0 1614
AutoFact: 60S acidic ribosomal protein P0-1 n=2 Tax=Arabidopsis RepID=RLA01_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
Complete
sp_v2.0_unigene21540 SustainPine v2.0 3245
AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor ef-2 0.0
Complete
sp_v2.0_unigene21564 SustainPine v2.0 1093
AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s19 0.0
Complete
sp_v2.0_unigene21662 SustainPine v2.0 1780
AutoFact: ribosome biogenesis regulatory protein-like protein [Arabidopsis thaliana] sp|Q9SH88.2|RRS1_ARATH RecName: Full=Ribosome biogenesis regulatory protein homolog dbj|BAE98464.1| hypothetical protein [Arabidopsis thaliana] gb|AEC09475.1| ribosome biogenesis r 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosome biogenesis regulatory protein 0.0
Complete
sp_v2.0_unigene21664 SustainPine v2.0 2666
AutoFact: Proliferating-cell nucleolar antigen p120, putative n=1 Tax=Ricinus communis RepID=B9S9W8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal rna methyltransferase nop2-like 0.0
Complete
sp_v2.0_unigene21717 SustainPine v2.0 999
AutoFact: small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_849414.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_001031682.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: small nuclear ribonucleoprotein associated protein b 8.18162e-41
Putative Complete
sp_v2.0_unigene21722 SustainPine v2.0 700
AutoFact: protein kinase 5 [Arabidopsis thaliana] gb|AAM13302.1| protein kinase 5 [Arabidopsis thaliana] 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase g11a-like 1.377e-31
Internal
sp_v2.0_unigene21877 SustainPine v2.0 2635
AutoFact: pantothenate kinase 2 (Hallervorden-Spatz syndrome) [Rattus norvegicus] gb|EDL80236.1| pantothenate kinase 2 (Hallervorden-Spatz syndrome) (predicted), isoform CRA_a [Rattus norvegicus] 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pantothenate kinase 1 0.0
N-terminus
sp_v2.0_unigene21969 SustainPine v2.0 2730
AutoFact: RecName: Full=RuBisCO large subunit-binding protein subunit beta, chloroplastic; AltName: Full=60 kDa chaperonin subunit beta; AltName: Full=CPN-60 beta; Flags: Precursor gb|AAA66365.1| chaperonin precursor [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ru large subunit-binding protein subunit chloroplastic-like 0.0
Complete
sp_v2.0_unigene22271 SustainPine v2.0 988
AutoFact: histone H4 [Hyacinthus orientalis] 6.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene22299 SustainPine v2.0 819
AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 6 0.0
N-terminus
sp_v2.0_unigene22300 SustainPine v2.0 602
AutoFact: histone H4 [Hyacinthus orientalis] 2.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene22516 SustainPine v2.0 2105
AutoFact: pfam04427, Brix, Brix domain 1.0e-34
FL-Next: sp=Ribosome production factor 2 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ribosome production factor 2 homolog 0.0
Complete
sp_v2.0_unigene22584 SustainPine v2.0 619
AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s30 4.72981e-27
Complete
sp_v2.0_unigene22827 SustainPine v2.0 1433
AutoFact: P18 n=1 Tax=Solanum chacoense RepID=Q6V9I5_SOLCH 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase complex subunit sap18 0.0
Complete
sp_v2.0_unigene22831 SustainPine v2.0 857
AutoFact: Histone H2A n=1 Tax=Populus trichocarpa RepID=B9I7E7_POPTR 2.0e-35
FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
Blast2go: histone h2a-like protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain