Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: lignin biosynthetic process

Term: GO:0009809  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene39672 SustainPine v2.0 399
AutoFact: Beta-glucosidase n=1 Tax=Pinus contorta RepID=Q9ZT64_PINCO 7.0e-24
FL-Next: tr=Beta-glucosidase; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Blast2go: beta-glucosidase d4 1.26838e-27
C-terminus
sp_v2.0_unigene59641 SustainPine v2.0 918
AutoFact: WS02793.CR_O20 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02793_O20 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein binding 0.0
Internal
sp_v2.0_unigene61639 SustainPine v2.0 1030
AutoFact: Putative class I chitinase (Fragment) n=1 Tax=Picea abies RepID=Q6SSF2_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: class i chitinase 0.0
N-terminus
sp_v2.0_unigene62708 SustainPine v2.0 774
AutoFact: Cinnamoyl-CoA reductase n=3 Tax=Pinaceae RepID=B3VKE9_9CONI 0.0
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Blast2go: cinnamoyl reductase 0.0
Putative N-terminus
sp_v2.0_unigene63731 SustainPine v2.0 1080
AutoFact: P-coumarate 3-hydroxylase n=4 Tax=Pinaceae RepID=Q8VZH6_PINTA 0.0
FL-Next: tr=P-coumarate 3-hydroxylase; Pinus taeda (Loblolly pine). 0.0
Blast2go: coumarate 3-hydroxylase 0.0
C-terminus
sp_v2.0_unigene69081 SustainPine v2.0 367
AutoFact: Fiber glycosyl hydrolase family 19 protein (Fragment) n=1 Tax=Gossypium barbadense RepID=Q6UA09_GOSBA 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: class i chitinase 1.21758e-32
Internal
sp_v2.0_unigene74935 SustainPine v2.0 299
AutoFact: RecName: Full=Probable mannitol dehydrogenase; AltName: Full=NAD-dependent mannitol dehydrogenase gb|AAL34328.1|L46856_1 cinnamyl-alcohol dehydrogenase [Medicago sativa] gb|AAC35846.1| cinnamyl-alcohol dehydrogenase [Medicago sativa] 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cinnamyl-alcohol dehydrogenase 1.90162e-24
Complete
sp_v2.0_unigene78499 SustainPine v2.0 951
AutoFact: S-adenosylmethionine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIR8_VITVI 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosyl methionine synthetase 0.0
C-terminus
sp_v2.0_unigene78711 SustainPine v2.0 461
AutoFact: RecName: Full=Glycine-rich RNA-binding protein 10 emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycine-rich rna-binding protein 8 3.81263e-21
Putative N-terminus
sp_v2.0_unigene78949 SustainPine v2.0 371
AutoFact: P-coumarate 3-hydroxylase n=4 Tax=Pinaceae RepID=Q8VZH6_PINTA 2.0e-19
FL-Next: tr=P-coumarate 3-hydroxylase; Pinus taeda (Loblolly pine). 0.0
Blast2go: coumarate 3-hydroxylase 5.39104e-23
C-terminus
sp_v2.0_unigene81103 SustainPine v2.0 949
AutoFact: Putative class I chitinase (Fragment) n=1 Tax=Picea abies RepID=Q6SSF2_PICAB 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: class i chitinase 0.0
Putative Complete
sp_v2.0_unigene82451 SustainPine v2.0 543
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Blast2go: s-adenosyl methionine synthetase 0.0
Internal
sp_v2.0_unigene82598 SustainPine v2.0 712
AutoFact: S-adenosylmethionine synthetase (Fragment) n=1 Tax=Dendrobium hybrid cultivar RepID=A4GKJ0_9ASPA 0.0
FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Blast2go: s-adenosylmethionine synthetase 0.0
Putative N-terminus
sp_v2.0_unigene91058 SustainPine v2.0 345
AutoFact: RecName: Full=Probable mannitol dehydrogenase; AltName: Full=NAD-dependent mannitol dehydrogenase gb|AAL34328.1|L46856_1 cinnamyl-alcohol dehydrogenase [Medicago sativa] gb|AAC35846.1| cinnamyl-alcohol dehydrogenase [Medicago sativa] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cinnamyl-alcohol dehydrogenase 5.72578e-40
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain