Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: ribonucleoprotein complex

Term: GO:0030529  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene15361 SustainPine v2.0 742
• AutoFact: S28 ribosomal protein (Fragment) n=1 Tax=Triticum aestivum RepID=Q7X9K4_WHEAT 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s28 2.37269e-25
Complete
sp_v2.0_unigene15748 SustainPine v2.0 1239
• AutoFact: RecName: Full=40S ribosomal protein S15 gb|AAC32121.1| probable 40S ribosomal protein S15 [Picea mariana] gb|ABK21037.1| unknown [Picea sitchensis] gb|ABK25817.1| unknown [Picea sitchensis] gb|ABK26826.1| unknown [Picea sitchensis] gb|ACN39898.1| unknown 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s15 0.0
Complete
sp_v2.0_unigene18376 SustainPine v2.0 775
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: ribosomal protein s15 family protein 3.47947e-20
Internal
sp_v2.0_unigene19063 SustainPine v2.0 806
• AutoFact: Ribosomal protein S13, mitochondrial n=14 Tax=Magnoliophyta RepID=RT13_DAUCA 3.99931e-42
• FL-Next: sp=Ribosomal protein S13, mitochondrial; Daucus carota (Carrot). Mitochondrion. 0.0
• Blast2go: ribosomal protein s13 5.00264e-43
Putative Complete
sp_v2.0_unigene19534 SustainPine v2.0 1137
• AutoFact: mitochondrial ribosomal protein L11 [Arabidopsis thaliana] emb|CAB54877.1| ribosomal protein L11 homolog [Arabidopsis thaliana] emb|CAB80265.1| ribosomal protein L11 homolog [Arabidopsis thaliana] gb|AAM67114.1| ribosomal protein L11-like protein [Arabido 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mitochondrial ribosomal protein l11 0.0
Complete
sp_v2.0_unigene21112 SustainPine v2.0 2325
• AutoFact: PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein, isoform 1 [Ornithorhynchus anatinus] 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heterogeneous nuclear ribonucleoprotein q 0.0
Complete
sp_v2.0_unigene21884 SustainPine v2.0 304
• AutoFact: Actin 1 (Fragment) n=21 Tax=Magnoliophyta RepID=Q94KC1_VITVI 4.0e-36
• FL-Next: tr=Actin; Larix gmelinii. 0.0
• Blast2go: actin 0.0
Internal
sp_v2.0_unigene22278 SustainPine v2.0 695
• AutoFact: 60S acidic ribosomal protein P0 n=6 Tax=Andropogoneae RepID=RLA0_MAIZE 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s acidic ribosomal protein p0 1.97783e-22
C-terminus
sp_v2.0_unigene23355 SustainPine v2.0 744
• AutoFact: Ribosomal protein L39e, putative n=1 Tax=Ricinus communis RepID=B9SC04_RICCO 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l39 1.1178e-29
Complete
sp_v2.0_unigene23678 SustainPine v2.0 1141
• AutoFact: 50S ribosomal protein L12, chloroplastic n=2 Tax=Spinacia oleracea RepID=RK12_SPIOL 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein l12 1.4013e-45
Complete
sp_v2.0_unigene24405 SustainPine v2.0 695
• AutoFact: S28 ribosomal protein (Fragment) n=1 Tax=Triticum aestivum RepID=Q7X9K4_WHEAT 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s28 1.61768e-25
Complete
sp_v2.0_unigene24413 SustainPine v2.0 434
• AutoFact: S28 ribosomal protein (Fragment) n=1 Tax=Triticum aestivum RepID=Q7X9K4_WHEAT 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s28 1.16746e-26
Complete
sp_v2.0_unigene24494 SustainPine v2.0 541
• AutoFact: S28 ribosomal protein (Fragment) n=1 Tax=Triticum aestivum RepID=Q7X9K4_WHEAT 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s28 3.77198e-26
Complete
sp_v2.0_unigene24978 SustainPine v2.0 507
• AutoFact: Ribosomal protein L39e, putative n=1 Tax=Ricinus communis RepID=B9SC04_RICCO 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l39 1.08242e-30
Complete
sp_v2.0_unigene27942 SustainPine v2.0 847
• AutoFact: 50S ribosomal protein L12, chloroplastic n=2 Tax=Spinacia oleracea RepID=RK12_SPIOL 6.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein l12 1.4013e-45
C-terminus
sp_v2.0_unigene31051 SustainPine v2.0 885
• AutoFact: Ribosomal protein S13 n=2 Tax=Cycas taitungensis RepID=B0BLG5_CYCTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein s13 0.0
Putative Complete
sp_v2.0_unigene31922 SustainPine v2.0 1111
• AutoFact: 50S ribosomal protein L12, chloroplastic n=2 Tax=Spinacia oleracea RepID=RK12_SPIOL 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein l12 2.8026e-45
Complete
sp_v2.0_unigene54887 SustainPine v2.0 327
• AutoFact: 60S ribosomal protein L3 n=7 Tax=Endopterygota RepID=F4WA35_9HYME 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l3 8.8332e-37
Internal
sp_v2.0_unigene60444 SustainPine v2.0 698
• AutoFact: S28 ribosomal protein (Fragment) n=1 Tax=Triticum aestivum RepID=Q7X9K4_WHEAT 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s28 1.64568e-25
Complete
sp_v2.0_unigene76797 SustainPine v2.0 567
• AutoFact: Ribosomal protein L39e, putative n=1 Tax=Ricinus communis RepID=B9SC04_RICCO 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l39 1.98581e-30
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain