Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4647 SustainPine v2.0 601
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] dbj|BAC43219.1| unknown protein [Arabidopsis thaliana] gb|AAP37677.1| At1g78915 [Arabidopsis thaliana] gb|AEE36174.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 5.0e-29
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: tetratricopeptide repeat-containing protein 2.53535e-36
C-terminus
sp_v2.0_unigene4670 SustainPine v2.0 1207
AutoFact: anaphase-promoting complex subunit 5 [Arabidopsis thaliana] sp|Q8H1U4.1|APC5_ARATH RecName: Full=Anaphase-promoting complex subunit 5; AltName: Full=Cyclosome subunit 5 gb|AAN10197.1| APC5 [Arabidopsis thaliana] gb|AEE28009.1| anaphase-promoting complex s 0.0
FL-Next: sp=Anaphase-promoting complex subunit 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: anaphase-promoting complex subunit 5 0.0
C-terminus
sp_v2.0_unigene4684 SustainPine v2.0 657
AutoFact: Putative hAT dimerisation domain-containing protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6AUA3_ORYSJ 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100780312 0.0
Internal
sp_v2.0_unigene4701 SustainPine v2.0 1228
AutoFact: COG0702: Predicted nucleoside-diphosphate-sugar epimerases (ISS) [Ostreococcus tauri] emb|CAL51450.1| COG0702: Predicted nucleoside-diphosphate-sugar epimerases (ISS) [Ostreococcus tauri] 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nad-dependent epimerase dehydratase 0.0
Complete
sp_v2.0_unigene4727 SustainPine v2.0 328
AutoFact: HEAT repeat, putative n=4 Tax=Oryza sativa Japonica Group RepID=Q53K35_ORYSJ 5.99756e-43
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: translational activator gcn1 0.0
Putative N-terminus
sp_v2.0_unigene4793 SustainPine v2.0 1047
AutoFact: zinc finger-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
sp_v2.0_unigene4818 SustainPine v2.0 2545
AutoFact: neutral invertase-like protein [Arabidopsis thaliana] ref|NP_001031790.1| neutral invertase-like protein [Arabidopsis thaliana] emb|CAB45447.1| invertase-like protein [Arabidopsis thaliana] emb|CAB80203.1| invertase-like protein [Arabidopsis thaliana] gb| 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene4853 SustainPine v2.0 1774
AutoFact: FAP multi-domain protein 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.35504e-29
Putative Complete
sp_v2.0_unigene4950 SustainPine v2.0 1197
AutoFact: [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene4968 SustainPine v2.0 1173
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SKR3_VITVI 6.0e-30
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ccr4-not transcription complex subunit 2.67825e-33
Putative N-terminus
sp_v2.0_unigene5039 SustainPine v2.0 759
AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9R6X8_RICCO 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u-box domain-containing protein 30-like 0.0
N-terminus
sp_v2.0_unigene5050 SustainPine v2.0 516
AutoFact: bZIP_1 domain containing protein 3.0e-06
Blast2go: hypothetical protein SERLA73DRAFT_145018 [Serpula lacrymans var. lacrymans S7.3] 4.33788e-09
Putative coding
sp_v2.0_unigene5054 SustainPine v2.0 1307
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SPI6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
sp_v2.0_unigene5055 SustainPine v2.0 1311
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9SJA4.2|CNG14_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 14; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 14 dbj|BAF00079.1| putative cyclic nucleoti 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide-gated ion 0.0
N-terminus
sp_v2.0_unigene5062 SustainPine v2.0 1075
AutoFact: Folate carrier protein, putative n=1 Tax=Ricinus communis RepID=B9S690_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene5108 SustainPine v2.0 588
AutoFact: Histidine kinase 1 n=2 Tax=Arabidopsis RepID=AHK1_ARATH 2.0e-07
FL-Next: sp=Histidine kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histidine kinase 1 5.76616e-09
Internal
sp_v2.0_unigene5180 SustainPine v2.0 1137
AutoFact: Os07g0664400 protein n=2 Tax=Oryza sativa RepID=Q0D3V0_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sex determination protein tasselseed 2 0.0
Complete
sp_v2.0_unigene5203 SustainPine v2.0 772
AutoFact: TIR/P-loop/LRR n=1 Tax=Pinus taeda RepID=Q8L8J0_PINTA 7.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tir p-loop lrr 5.9675e-36
Putative Complete
sp_v2.0_unigene5260 SustainPine v2.0 577
AutoFact: pfam03810, IBN_N, Importin-beta N-terminal domain 2.0e-09
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 7.28675e-44
N-terminus
sp_v2.0_unigene5353 SustainPine v2.0 990
AutoFact: Calmodulin-like n=3 Tax=Oryza sativa RepID=Q5Z905_ORYSJ 3.0e-17
FL-Next: tr=Calmodulin-like; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: p30 dbc 8.81767e-19
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain