Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1803 SustainPine v2.0 2905
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
Putative Complete
sp_v2.0_unigene22652 SustainPine v2.0 723
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: tr=Levopimaradiene/abietadiene synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: terpene synthase 0.0
C-terminus
sp_v2.0_unigene27562 SustainPine v2.0 2032
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene31935 SustainPine v2.0 991
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: tr=Levopimaradiene/abietadiene synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene33944 SustainPine v2.0 776
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: taxadiene synthase 0.0
N-terminus
sp_v2.0_unigene43224 SustainPine v2.0 871
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
N-terminus
sp_v2.0_unigene45380 SustainPine v2.0 608
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: taxadiene synthase 0.0
N-terminus
sp_v2.0_unigene58750 SustainPine v2.0 501
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 2.0e-19
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: terpene synthase 1.26279e-21
C-terminus
sp_v2.0_unigene77571 SustainPine v2.0 404
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 2.0e-27
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: terpene synthase 1.54387e-31
C-terminus
sp_v2.0_unigene79832 SustainPine v2.0 400
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 1.0e-25
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: terpene synthase 3.71161e-28
C-terminus
sp_v2.0_unigene91166 SustainPine v2.0 624
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: terpene synthase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain