Sustainpine_db
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Assembly Name: inia v1.0

Name: structural constituent of ribosome

Term: GO:0003735  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
inia_v1.0_unigene216 inia v1.0 661
• AutoFact: ribosomal protein L17-1 [Poa secunda] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l17 0.0
Putative N-terminus
inia_v1.0_unigene343 inia v1.0 336
• AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9RM38_RICCO 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l38 6.16412e-40
Complete
inia_v1.0_unigene862 inia v1.0 587
• AutoFact: 60S ribosomal protein L26-2 n=2 Tax=Arabidopsis RepID=RL262_ARATH 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l26 0.0
Complete
inia_v1.0_unigene866 inia v1.0 756
• AutoFact: Ribosomal protein S7 n=3 Tax=Cucujiformia RepID=D1M806_9CUCU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein s7 0.0
Putative Complete
inia_v1.0_unigene1304 inia v1.0 1156
• AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: global transcription factor group 0.0
C-terminus
inia_v1.0_unigene1428 inia v1.0 1028
• AutoFact: 50S ribosomal protein L10, putative n=1 Tax=Ricinus communis RepID=B9RY97_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
inia_v1.0_unigene2242 inia v1.0 716
• AutoFact: 30S ribosomal protein S10, putative n=1 Tax=Ricinus communis RepID=B9S9Q5_RICCO 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s10 0.0
Complete
inia_v1.0_unigene2294 inia v1.0 985
• AutoFact: Ribosomal L18p/L5e family protein [Arabidopsis thaliana] dbj|BAB01882.1| unnamed protein product [Arabidopsis thaliana] gb|AAM63600.1| unknown [Arabidopsis thaliana] gb|AAN41334.1| unknown protein [Arabidopsis thaliana] dbj|BAH19862.1| AT3G20230 [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
inia_v1.0_unigene2463 inia v1.0 1715
• AutoFact: ribosomal protein L18e/L15 [Arabidopsis thaliana] dbj|BAB11434.1| unnamed protein product [Arabidopsis thaliana] gb|AAL91235.1| unknown protein [Arabidopsis thaliana] gb|AAM62464.1| unknown [Arabidopsis thaliana] gb|AAM91243.1| unknown protein [Arabidopsi 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: protein 0.0
Complete
inia_v1.0_unigene2573 inia v1.0 826
• AutoFact: PREDICTED: similar to RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural constituent of ribosome isoform 2 n=1 Tax=Vitis vinifera RepID=UPI000198595A 6.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l18a 2.45188e-36
Putative Complete
inia_v1.0_unigene2759 inia v1.0 837
• AutoFact: ribosomal protein L17-1 [Poa secunda] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l17 0.0
Complete
inia_v1.0_unigene2760 inia v1.0 687
• AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 8.99634e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l35 0.0
Complete
inia_v1.0_unigene2827 inia v1.0 1481
• AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
inia_v1.0_unigene3414 inia v1.0 604
• AutoFact: 30S ribosomal protein S13 [Arabidopsis thaliana] sp|P42732.1|RR13_ARATH RecName: Full=30S ribosomal protein S13, chloroplastic; AltName: Full=CS13; Flags: Precursor emb|CAA79013.1| chloroplast 30S ribosomal protein S13 [Arabidopsis thaliana] emb|CAA88028. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s13 0.0
Complete
inia_v1.0_unigene4019 inia v1.0 838
• AutoFact: 40S ribosomal protein S12 n=4 Tax=Picea sitchensis RepID=A9NQ79_PICSI 0.0
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s12 0.0
Complete
inia_v1.0_unigene4053 inia v1.0 938
• AutoFact: 40S ribosomal protein S12 n=4 Tax=Picea sitchensis RepID=A9NQ79_PICSI 0.0
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s12 0.0
Complete
inia_v1.0_unigene4543 inia v1.0 1744
• AutoFact: 60S ribosomal protein L26-2 n=2 Tax=Arabidopsis RepID=RL262_ARATH 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l26 0.0
Complete
inia_v1.0_unigene4916 inia v1.0 199
• AutoFact: 30S ribosomal protein S10, putative n=1 Tax=Ricinus communis RepID=B9S9Q5_RICCO 5.00264e-43
• Blast2go: 30s ribosomal protein s10 0.0
unknown
inia_v1.0_unigene4990 inia v1.0 112
• AutoFact: 60S ribosomal protein L26-2 n=2 Tax=Arabidopsis RepID=RL262_ARATH 3.0e-37
• Blast2go: 60s ribosomal protein l26 0.0
unknown
inia_v1.0_unigene5102 inia v1.0 138
• AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9RM38_RICCO 5.0e-28
• Blast2go: 60s ribosomal protein l38 6.16412e-40
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain