Sustainpine_db
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Assembly Name: inia v1.0

Name: intracellular part

Term: GO:0044424  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
inia_v1.0_unigene12 inia v1.0 1230
• AutoFact: 40S ribosomal protein S8 n=4 Tax=Picea sitchensis RepID=A9NNT7_PICSI 0.0
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s8 0.0
Complete
inia_v1.0_unigene19 inia v1.0 1957
• AutoFact: 60S ribosomal protein L34, putative [Solanum demissum] gb|ABO92971.1| putative ribosomal protein L34e [Solanum tuberosum] 8.00141e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l34 0.0
Complete
inia_v1.0_unigene309 inia v1.0 219
• AutoFact: 60S ribosomal protein L44 [Phalaenopsis hybrid cultivar] 0.0
• Blast2go: 60s ribosomal protein l44 0.0
unknown
inia_v1.0_unigene639 inia v1.0 748
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta-tubulin 2 0.0
N-terminus
inia_v1.0_unigene1034 inia v1.0 1206
• AutoFact: Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chloroplast oxygen-evolving enhancer protein 1 0.0
Complete
inia_v1.0_unigene2049 inia v1.0 1407
• AutoFact: U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana] ref|NP_850580.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana] gb|AAM61336.1| Sm protein, putative [Arabidopsis thaliana] gb|AAO22620.1| putative Sm protein [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u6 snrna-associated sm-like protein lsm1 0.0
Complete
inia_v1.0_unigene2060 inia v1.0 1058
• AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AED91455.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription elongation expressed 0.0
C-terminus
inia_v1.0_unigene2428 inia v1.0 890
• AutoFact: 60S ribosomal protein L37a, putative n=2 Tax=fabids RepID=B9RUR2_RICCO 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l37a 0.0
Complete
inia_v1.0_unigene2577 inia v1.0 1297
• AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hexaubiquitin protein 0.0
Putative Complete
inia_v1.0_unigene3136 inia v1.0 1339
• AutoFact: Unassigned protein
• FL-Next: tr=Transducin/WD-40 repeat-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
inia_v1.0_unigene4003 inia v1.0 1873
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta-tubulin 2 0.0
Complete
inia_v1.0_unigene4044 inia v1.0 1294
• AutoFact: [O] COG5272 Ubiquitin 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin 0.0
N-terminus
inia_v1.0_unigene4071 inia v1.0 635
• AutoFact: [O] COG5272 Ubiquitin 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: ubiquitin 0.0
Putative Complete
inia_v1.0_unigene4072 inia v1.0 864
• AutoFact: [O] COG5272 Ubiquitin 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: ubiquitin 0.0
Putative Complete
inia_v1.0_unigene4679 inia v1.0 1822
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta-tubulin 2 0.0
Complete
inia_v1.0_unigene4734 inia v1.0 1086
• AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hexaubiquitin protein 0.0
Putative Complete
inia_v1.0_unigene4812 inia v1.0 474
• AutoFact: 60S ribosomal protein L34, putative [Solanum demissum] gb|ABO92971.1| putative ribosomal protein L34e [Solanum tuberosum] 8.00141e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l34 0.0
N-terminus
inia_v1.0_unigene4869 inia v1.0 666
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: protein 0.0
C-terminus
inia_v1.0_unigene4967 inia v1.0 520
• AutoFact: Unassigned protein
• Blast2go: protein 5.81814e-22
Putative coding
inia_v1.0_unigene5330 inia v1.0 470
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain