Sustainpine_db
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Assembly Name: inia v1.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
inia_v1.0_unigene45 inia v1.0 585
AutoFact: Histone H2A.6 n=6 Tax=Spermatophyta RepID=H2A6_ARATH 7.0e-35
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 1.96182e-44
Complete
inia_v1.0_unigene271 inia v1.0 534
AutoFact: 40S ribosomal protein S20-1 n=12 Tax=rosids RepID=RS201_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s20 0.0
C-terminus
inia_v1.0_unigene468 inia v1.0 1791
AutoFact: Serine/threonine-protein phosphatase PP2A-3 catalytic subunit n=15 Tax=Embryophyta RepID=PP2A3_ARATH 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pp2ac-2 - phosphatase 2a isoform 2 belonging to family 2 0.0
Complete
inia_v1.0_unigene471 inia v1.0 772
AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor ef-2 0.0
C-terminus
inia_v1.0_unigene495 inia v1.0 1065
AutoFact: Protein arginine N-methyltransferase 1 n=2 Tax=Andropogoneae RepID=B6TIG8_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine methyltransferease 0.0
C-terminus
inia_v1.0_unigene509 inia v1.0 519
AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAU94425.1| At1g65030 [Arabidopsis thaliana] gb|AEE34317.1| WD40 domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: p21-activated protein kinase-interacting protein 1-like 0.0
unknown
inia_v1.0_unigene516 inia v1.0 165
AutoFact: 40S ribosomal protein S20-1 n=12 Tax=rosids RepID=RS201_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s20 0.0
N-terminus
inia_v1.0_unigene635 inia v1.0 874
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 0.0
Internal
inia_v1.0_unigene724 inia v1.0 1249
AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 6 0.0
Complete
inia_v1.0_unigene775 inia v1.0 798
AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pointed first leaf 0.0
Complete
inia_v1.0_unigene813 inia v1.0 786
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 0.0
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2a 0.0
Complete
inia_v1.0_unigene894 inia v1.0 419
AutoFact: pfam02731, SKIP_SNW, SKIP/SNW domain 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: chromatin protein family 0.0
Internal
inia_v1.0_unigene901 inia v1.0 2038
AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor ef-2 0.0
Complete
inia_v1.0_unigene1053 inia v1.0 1679
AutoFact: oligosaccharyltransferase complex subunit beta [Arabidopsis thaliana] gb|AAL16268.1|AF428338_1 AT5g66680/MSN2_7 [Arabidopsis thaliana] gb|AAN12926.1| putative dolichyl-di-phosphooligosaccharide glycotransferase (oligosaccharyltransferase) [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kda subunit 0.0
Complete
inia_v1.0_unigene1057 inia v1.0 1149
AutoFact: U1snRNP-specific protein, U1A n=1 Tax=Solanum tuberosum RepID=Q41498_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small nuclear ribonucleoprotein u1a 0.0
Complete
inia_v1.0_unigene1077 inia v1.0 1461
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructose-bisphosphate aldolase 0.0
Complete
inia_v1.0_unigene1121 inia v1.0 2062
AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TL22_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna tbp-interacting protein 0.0
Complete
inia_v1.0_unigene1136 inia v1.0 766
AutoFact: ribosomal protein L7Ae-like [Brassica rapa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
inia_v1.0_unigene1239 inia v1.0 1313
AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 6 0.0
Complete
inia_v1.0_unigene1327 inia v1.0 900
AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s19 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain