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Assembly Name: inia v1.0

Name: nuclear mRNA splicing, via spliceosome

Term: GO:0000398  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
inia_v1.0_unigene329 inia v1.0 450
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: rna-binding protein 5 10 0.0
Internal
inia_v1.0_unigene640 inia v1.0 1134
AutoFact: PREDICTED: similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1) isoform 17 [Canis familiaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly binding cytoplasmic 1 0.0
C-terminus
inia_v1.0_unigene674 inia v1.0 841
AutoFact: RNA helicase [Arabidopsis thaliana] gb|AAD39319.1|AC007258_8 Very similar to helicases [Arabidopsis thaliana] dbj|BAD44599.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33616.1| RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: skiv2l2 protein 0.0
C-terminus
inia_v1.0_unigene1330 inia v1.0 1214
AutoFact: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Arabidopsis thaliana] sp|O22212.1|PRP4_ARATH RecName: Full=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; AltName: Full=Protein EMBRYO DEFECTIVE 2776 gb|AAB84332.1| putative small nuclear 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u4 u6 small nuclear ribonucleoprotein prp4-like 0.0
C-terminus
inia_v1.0_unigene2469 inia v1.0 905
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich-splicing factor rsp40-like 0.0
C-terminus
inia_v1.0_unigene5295 inia v1.0 398
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
Blast2go: u1 small nuclear ribonucleoprotein 70 kda-like 0.0
unknown
inia_v1.0_unigene5712 inia v1.0 404
AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO 0.0
FL-Next: Isoform Short of U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana GN=RNU1 0.0
Blast2go: u1 small nuclear ribonucleoprotein-70k 0.0
Internal
inia_v1.0_unigene5994 inia v1.0 152
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
Blast2go: rna-binding protein 5 10 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain