Sustainpine_db
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Assembly Name: inia v1.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
inia_v1.0_unigene17 inia v1.0 1374
AutoFact: proteasome-like protein [Arabidopsis thaliana] dbj|BAC43481.1| unknown protein [Arabidopsis thaliana] gb|AEC06895.1| proteasome-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
inia_v1.0_unigene26 inia v1.0 229
AutoFact: DUF1421 multi-domain protein 9.0e-18
Blast2go: zinc finger protein 0.0
unknown
inia_v1.0_unigene49 inia v1.0 163
AutoFact: putative DnaJ protein [Camellia sinensis] 6.0e-28
Blast2go: heat shock protein binding protein 0.0
unknown
inia_v1.0_unigene78 inia v1.0 454
AutoFact: DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] gb|AAM26693.1| At5g26743 [Arabidopsis thaliana] gb|AAO42779.1| At5g26743 [Arabidopsis thaliana] gb|AED93564.1| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 0.0
Internal
inia_v1.0_unigene145 inia v1.0 655
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hd domain class transcription factor 0.0
N-terminus
inia_v1.0_unigene153 inia v1.0 686
AutoFact: CONSTANS interacting protein 2a n=1 Tax=Solanum lycopersicum RepID=Q2VY18_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-binding transcription 0.0
Internal
inia_v1.0_unigene213 inia v1.0 371
AutoFact: Basic-leucine zipper transcription factor-like protein n=4 Tax=Arabidopsis RepID=B3H7M2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bzip transcription factor 0.0
C-terminus
inia_v1.0_unigene252 inia v1.0 1708
AutoFact: RNA pol II accessory factor CDC73-like protein [Arabidopsis thaliana] dbj|BAB01474.1| unnamed protein product [Arabidopsis thaliana] gb|AAL38878.1| unknown protein [Arabidopsis thaliana] gb|AAN13180.1| unknown protein [Arabidopsis thaliana] gb|AEE76656.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna polymerase ii assessory factor cdc73p 0.0
Complete
inia_v1.0_unigene284 inia v1.0 1060
AutoFact: Chloroplast HSP70 n=4 Tax=rosids RepID=A2TJV6_CUCSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: stromal 70 kda heat shock-related chloroplastic-like 0.0
C-terminus
inia_v1.0_unigene290 inia v1.0 990
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads box transcription factor 6 0.0
Complete
inia_v1.0_unigene313 inia v1.0 1626
AutoFact: Elongation factor 1-alpha n=1 Tax=Arabidopsis thaliana RepID=F4HUA0_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1-alpha 0.0
Complete
inia_v1.0_unigene315 inia v1.0 1091
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100254898 0.0
C-terminus
inia_v1.0_unigene323 inia v1.0 1628
AutoFact: MYBPA1 protein n=2 Tax=Vitis vinifera RepID=A4F4L3_VITVI 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb-like transcription factor 2 1.06543e-28
Putative N-terminus
inia_v1.0_unigene327 inia v1.0 474
AutoFact: SGF29 tudor-like domain-containing protein [Arabidopsis thaliana] gb|AAL86293.1| unknown protein [Arabidopsis thaliana] gb|AAM67518.1| unknown protein [Arabidopsis thaliana] gb|AEE77322.1| SGF29 tudor-like domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: sgf29 tudor-like domain -containing protein 0.0
unknown
inia_v1.0_unigene328 inia v1.0 1558
AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl-binding domain protein 0.0
C-terminus
inia_v1.0_unigene329 inia v1.0 450
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: rna-binding protein 5 10 0.0
Internal
inia_v1.0_unigene330 inia v1.0 998
AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 0.0
FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: b-class mads-box transcription factor 0.0
Complete
inia_v1.0_unigene339 inia v1.0 998
AutoFact: polyubiquitin 4 [Arabidopsis thaliana] ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp. lyrata] sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA31331.1| 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin 0.0
Complete
inia_v1.0_unigene348 inia v1.0 1088
AutoFact: tRNA/rRNA methyltransferase (SpoU) family protein n=3 Tax=Arabidopsis RepID=F4JP86_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna rrna methyltransferase family protein 0.0
Putative C-terminus
inia_v1.0_unigene391 inia v1.0 1455
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
FL-Next: sp=DNA damage-binding protein 1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna damage-binding protein 1a 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain