Sustainpine_db
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Assembly Name: inia v1.0

Name: Ubiquitin--protein ligase.

Term: EC:6.3.2.19  Help

Source: EC from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
inia_v1.0_unigene244 inia v1.0 542
• AutoFact: KAP multi-domain protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
inia_v1.0_unigene702 inia v1.0 192
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
• Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
unknown
inia_v1.0_unigene797 inia v1.0 134
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R8Q6_RICCO 0.0
• Blast2go: protein 0.0
unknown
inia_v1.0_unigene810 inia v1.0 336
• AutoFact: KAP multi-domain protein 2.0e-06
• FL-Next: sp=U-box domain-containing protein 41; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
inia_v1.0_unigene1072 inia v1.0 1059
• AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: at5g13530-like protein 0.0
C-terminus
inia_v1.0_unigene1525 inia v1.0 1079
• AutoFact: peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] gb|AAM13295.1| peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: peptidyl-prolyl cis-trans isomerase-like 2-like 0.0
Putative Complete
inia_v1.0_unigene1582 inia v1.0 1952
• AutoFact: TIR1/AFB auxin receptor protein PintaTIR1 n=1 Tax=Pinus taeda RepID=C9EHS7_PINTA 0.0
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaTIR1; Pinus taeda (Loblolly pine). 0.0
• Blast2go: transport inhibitor response 1 0.0
C-terminus
inia_v1.0_unigene1826 inia v1.0 1450
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFB9_RICCO 2.0e-25
• Blast2go: ring u-box domain-containing protein 8.79016e-28
Coding
inia_v1.0_unigene2029 inia v1.0 1207
• AutoFact: ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_974600.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_001078436.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] dbj|BAH30533.1| hypothetical protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: ubiquitin-protein ligase ubr7 0.0
Internal
inia_v1.0_unigene2037 inia v1.0 759
• AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin-protein ligase 1 0.0
C-terminus
inia_v1.0_unigene2393 inia v1.0 1245
• AutoFact: Ubiquitin-conjugating enzyme 1, E2 n=1 Tax=Selaginella moellendorffii RepID=D8SK34_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin carrier protein 0.0
Complete
inia_v1.0_unigene2642 inia v1.0 1766
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R8Q6_RICCO 0.0
• FL-Next: sp=U-box domain-containing protein 43; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
inia_v1.0_unigene2709 inia v1.0 1170
• AutoFact: Ubiquitin carrier protein n=13 Tax=Tracheophyta RepID=Q69JN7_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-conjugating enzyme-like protein 0.0
Complete
inia_v1.0_unigene2796 inia v1.0 2009
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
• FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
C-terminus
inia_v1.0_unigene3075 inia v1.0 1138
• AutoFact: YDG_SRA multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
C-terminus
inia_v1.0_unigene3347 inia v1.0 1081
• AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
• Blast2go: f-box family protein 0.0
C-terminus
inia_v1.0_unigene3372 inia v1.0 1377
• AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9RU03_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u-box domain-containing protein 0.0
Complete
inia_v1.0_unigene3396 inia v1.0 592
• AutoFact: Ubiquitin-conjugating enzyme E2 35 n=42 Tax=Embryophyta RepID=UBC35_ARATH 0.0
• FL-Next: Isoform 2 of Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36 0.0
• Blast2go: protein 0.0
Complete
inia_v1.0_unigene3760 inia v1.0 1270
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5A9Q7_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-conjugating enzyme e2 0.0
Complete
inia_v1.0_unigene3822 inia v1.0 682
• AutoFact: ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_974600.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_001078436.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] dbj|BAH30533.1| hypothetical protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Os06g0529800 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: ubiquitin-protein ligase ubr7 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain