|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
uagpf_v2_unigene41919
|
uagpf v2.0
|
327
|
|
• AutoFact: OSJNBb0049I21.5 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XRV6_ORYSJ
|
3.0e-22
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
4.15575e-22
|
|
Putative C-terminus
|
|
uagpf_v2_unigene42699
|
uagpf v2.0
|
406
|
|
• AutoFact: Gag-pol n=1 Tax=Zea mays RepID=Q8W1D1_MAIZE
|
1.0e-09
|
|
• FL-Next: tr=Gag-pol; Zea mays (Maize).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
2.95361e-09
|
|
Internal
|
|
uagpf_v2_unigene43496
|
uagpf v2.0
|
270
|
|
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVL5_9POAL
|
7.0e-10
|
|
• FL-Next: tr=B1292H11.7 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
2.2056e-12
|
|
Internal
|
|
uagpf_v2_unigene43918
|
uagpf v2.0
|
330
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Oryza sativa Japonica Group RepID=Q53KI9_ORYSJ
|
5.0e-10
|
|
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
1.61374e-12
|
|
Internal
|
|
uagpf_v2_unigene43968
|
uagpf v2.0
|
336
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2RB45_ORYSJ
|
3.0e-12
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
6.78746e-15
|
|
Internal
|
|
uagpf_v2_unigene44068
|
uagpf v2.0
|
306
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=8 Tax=Oryza sativa RepID=Q2QR60_ORYSJ
|
3.0e-21
|
|
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
8.57647e-25
|
|
Internal
|
|
uagpf_v2_unigene44273
|
uagpf v2.0
|
303
|
|
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVQ8_9POAL
|
4.0e-18
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
3.48472e-21
|
|
N-terminus
|
|
uagpf_v2_unigene44507
|
uagpf v2.0
|
366
|
|
• AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE
|
5.0e-24
|
|
• FL-Next: tr=Putative uncharacterized protein orf215; Nicotiana tabacum (Common tobacco). Mitochondrion.
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
1.01887e-28
|
|
Internal
|
|
uagpf_v2_unigene44605
|
uagpf v2.0
|
348
|
|
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL
|
8.0e-27
|
|
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis.
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
5.06301e-31
|
|
Internal
|
|
uagpf_v2_unigene44769
|
uagpf v2.0
|
262
|
|
• AutoFact: Polyprotein n=1 Tax=Zea mays RepID=A5JSC4_MAIZE
|
8.0e-18
|
|
• FL-Next: tr=Putative polyprotein; Oryza sativa (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
5.79546e-19
|
|
Internal
|
|
uagpf_v2_unigene44843
|
uagpf v2.0
|
250
|
|
• AutoFact: OSJNBa0033G05.1 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XJX8_ORYSJ
|
1.0e-09
|
|
• FL-Next: tr=OSJNBa0033G05.1 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
1.4908e-09
|
|
Internal
|
|
uagpf_v2_unigene46034
|
uagpf v2.0
|
241
|
|
• AutoFact: Polyprotein n=1 Tax=Oryza australiensis RepID=Q0ZLH4_9ORYZ
|
5.0e-16
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
4.2167e-19
|
|
Internal
|
|
uagpf_v2_unigene47005
|
uagpf v2.0
|
420
|
|
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVD3_9POAL
|
2.0e-16
|
|
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis.
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
1.64618e-18
|
|
Internal
|
|
uagpf_v2_unigene47688
|
uagpf v2.0
|
440
|
|
• AutoFact: Ty3-gypsy retrotransposon protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE2_CUCME
|
9.0e-21
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
1.61717e-23
|
|
Complete
|
|
uagpf_v2_unigene47994
|
uagpf v2.0
|
394
|
|
• AutoFact: OSIGBa0093M15.5 protein n=1 Tax=Oryza sativa RepID=Q01MK0_ORYSA
|
1.0e-25
|
|
• FL-Next: tr=OSIGBa0093M15.5 protein; Oryza sativa (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
2.01081e-29
|
|
Internal
|
|
uagpf_v2_unigene48710
|
uagpf v2.0
|
285
|
|
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL
|
1.0e-07
|
|
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis.
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
1.73321e-09
|
|
Internal
|
|
uagpf_v2_unigene48721
|
uagpf v2.0
|
296
|
|
• AutoFact: pfam00078, RVT_1, Reverse transcriptase (RNA-dependent DNA polymerase)
|
9.0e-06
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
2.62031e-09
|
|
Internal
|
|
uagpf_v2_unigene48843
|
uagpf v2.0
|
317
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QS58_ORYSJ
|
3.0e-11
|
|
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
3.6729e-13
|
|
Internal
|
|
uagpf_v2_unigene49441
|
uagpf v2.0
|
276
|
|
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q8SB62_ORYSJ
|
7.0e-09
|
|
• FL-Next: tr=OSJNBa0065O17.9 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
8.28991e-09
|
|
Internal
|
|
uagpf_v2_unigene49450
|
uagpf v2.0
|
339
|
|
• AutoFact: OSJNBa0004L19.12 protein n=1 Tax=Oryza sativa RepID=Q7XVX3_ORYSA
|
8.0e-16
|
|
• FL-Next: tr=OSJNBa0004L19.12 protein; Oryza sativa (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
1.69619e-15
|
|
Internal
|
