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Assembly Name: uagpf v2.0

Name: membrane protein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene1718 uagpf v2.0 355
• AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 0.0
Internal
uagpf_v2_unigene4148 uagpf v2.0 589
• AutoFact: Sad1_UNC domain containing protein 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 0.0
N-terminus
uagpf_v2_unigene6022 uagpf v2.0 878
• AutoFact: serinc-domain containing protein [Arabidopsis thaliana] ref|NP_001185008.1| serinc-domain containing protein [Arabidopsis thaliana] gb|AAF18512.1|AC010924_25 Contains similarity to gb|AF181686 membrane protein TMS1d from Drosophila melanogaster. ESTs gb|R 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 0.0
C-terminus
uagpf_v2_unigene6726 uagpf v2.0 625
• AutoFact: Sad1_UNC domain containing protein 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 0.0
C-terminus
uagpf_v2_unigene6944 uagpf v2.0 651
• AutoFact: serinc-domain containing protein [Arabidopsis thaliana] ref|NP_001185008.1| serinc-domain containing protein [Arabidopsis thaliana] gb|AAF18512.1|AC010924_25 Contains similarity to gb|AF181686 membrane protein TMS1d from Drosophila melanogaster. ESTs gb|R 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 0.0
N-terminus
uagpf_v2_unigene10529 uagpf v2.0 367
• AutoFact: Sad1_UNC domain containing protein 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 0.0
Internal
uagpf_v2_unigene14330 uagpf v2.0 519
• AutoFact: serinc-domain containing protein [Arabidopsis thaliana] ref|NP_001185008.1| serinc-domain containing protein [Arabidopsis thaliana] gb|AAF18512.1|AC010924_25 Contains similarity to gb|AF181686 membrane protein TMS1d from Drosophila melanogaster. ESTs gb|R 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 0.0
Internal
uagpf_v2_unigene17152 uagpf v2.0 834
• AutoFact: Ribosome associated membrane protein RAMP4 [Arabidopsis thaliana] ref|NP_564279.1| Ribosome associated membrane protein RAMP4 [Arabidopsis thaliana] ref|XP_002890722.1| hypothetical protein ARALYDRAFT_472929 [Arabidopsis lyrata subsp. lyrata] ref|XP_00289 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 9.12863e-16
Complete
uagpf_v2_unigene17621 uagpf v2.0 740
• AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 0.0
C-terminus
uagpf_v2_unigene18458 uagpf v2.0 604
• AutoFact: Ribosome associated membrane protein RAMP4 [Arabidopsis thaliana] ref|NP_564279.1| Ribosome associated membrane protein RAMP4 [Arabidopsis thaliana] ref|XP_002890722.1| hypothetical protein ARALYDRAFT_472929 [Arabidopsis lyrata subsp. lyrata] ref|XP_00289 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 1.03872e-15
Complete
uagpf_v2_unigene30944 uagpf v2.0 428
• AutoFact: Sad1_UNC domain containing protein 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 0.0
Internal
uagpf_v2_unigene33669 uagpf v2.0 392
• AutoFact: putative membrane protein [Arabidopsis thaliana] gb|AAG23435.1|AC084165_1 unknown protein [Arabidopsis thaliana] gb|AAG50795.1|AC074309_12 unknown protein [Arabidopsis thaliana] gb|AAK63984.1| At1g32080/F3C3_12 [Arabidopsis thaliana] gb|AAM26636.1| At1g32 9.0e-13
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: membrane protein 8.81773e-15
Internal
uagpf_v2_unigene34217 uagpf v2.0 294
• AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 0.0
N-terminus
uagpf_v2_unigene36198 uagpf v2.0 507
• AutoFact: serinc-domain containing protein [Arabidopsis thaliana] ref|NP_001185008.1| serinc-domain containing protein [Arabidopsis thaliana] gb|AAF18512.1|AC010924_25 Contains similarity to gb|AF181686 membrane protein TMS1d from Drosophila melanogaster. ESTs gb|R 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 0.0
Internal
uagpf_v2_unigene36963 uagpf v2.0 419
• AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain