Sustainpine_db
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Assembly Name: uagpf v2.0

Name: reverse transcriptase

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene39009 uagpf v2.0 387
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 2.0e-20
FL-Next: tr=Putative non-LTR retroelement reverse transcriptase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: reverse transcriptase 4.78311e-20
Internal
uagpf_v2_unigene39024 uagpf v2.0 389
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 2.6263e-21
Internal
uagpf_v2_unigene40109 uagpf v2.0 326
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 1.0e-21
FL-Next: tr=Putative non-LTR retroelement reverse transcriptase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: reverse transcriptase 1.60354e-26
Internal
uagpf_v2_unigene40743 uagpf v2.0 319
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q56GE2_GINBI 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: reverse transcriptase 4.2316e-09
Internal
uagpf_v2_unigene40772 uagpf v2.0 230
AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 6.0e-06
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: reverse transcriptase 1.3102e-08
Internal
uagpf_v2_unigene41676 uagpf v2.0 390
AutoFact: OSIGBa0101K10.6 protein n=1 Tax=Oryza sativa RepID=Q01MA8_ORYSA 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 4.0216e-26
Putative Complete
uagpf_v2_unigene41731 uagpf v2.0 395
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q10FX2_ORYSJ 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.5685e-16
N-terminus
uagpf_v2_unigene41954 uagpf v2.0 324
AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.35217e-32
Internal
uagpf_v2_unigene42318 uagpf v2.0 266
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.21322e-24
Internal
uagpf_v2_unigene42500 uagpf v2.0 439
AutoFact: PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform 4 n=2 Tax=Canis lupus familiaris RepID=UPI00005A34CA 5.0e-16
Blast2go: reverse transcriptase 4.43836e-22
unknown
uagpf_v2_unigene42894 uagpf v2.0 412
AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Arabidopsis thaliana RepID=Q9ZUF0_ARATH 1.0e-07
FL-Next: tr=Putative non-LTR retroelement reverse transcriptase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: reverse transcriptase 1.81992e-08
Internal
uagpf_v2_unigene43291 uagpf v2.0 339
AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE 2.0e-29
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 2.72557e-38
Putative N-terminus
uagpf_v2_unigene44211 uagpf v2.0 323
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.1108e-37
Internal
uagpf_v2_unigene45182 uagpf v2.0 397
AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 1.0e-31
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 2.99034e-37
Putative N-terminus
uagpf_v2_unigene45896 uagpf v2.0 412
AutoFact: Reverse transcriptase-like protein (Fragment) n=5 Tax=Amaranthus quitensis RepID=Q9FQJ6_9CARY 2.0e-05
Blast2go: reverse transcriptase 6.16502e-07
Putative coding
uagpf_v2_unigene46112 uagpf v2.0 311
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10PF2_ORYSJ 8.0e-17
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: reverse transcriptase 9.15442e-20
Internal
uagpf_v2_unigene46315 uagpf v2.0 415
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q9ZRJ9_GINBI 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: reverse transcriptase 9.14588e-12
Internal
uagpf_v2_unigene46543 uagpf v2.0 213
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 4.71458e-36
Internal
uagpf_v2_unigene46634 uagpf v2.0 301
AutoFact: OSJNBa0086O06.14 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XLZ5_ORYSJ 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.47807e-09
Putative N-terminus
uagpf_v2_unigene46884 uagpf v2.0 404
AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Spermatophyta RepID=P93687_SECCE 6.0e-20
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 1.13919e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain