Sustainpine_db
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Assembly Name: uagpf v2.0

Name: rna binding protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1284 uagpf v2.0 559
AutoFact: ENT domain containing protein 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 1.96821e-13
C-terminus
uagpf_v2_unigene2689 uagpf v2.0 1094
AutoFact: agenet domain-containing protein [Arabidopsis thaliana] gb|AAY34173.1| At1g09320 [Arabidopsis thaliana] gb|AEE28429.1| agenet domain-containing protein [Arabidopsis thaliana] 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 7.99877e-40
Complete
uagpf_v2_unigene6367 uagpf v2.0 502
AutoFact: RNA binding protein n=1 Tax=Zea mays RepID=B6T9D3_MAIZE 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
uagpf_v2_unigene8072 uagpf v2.0 389
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
uagpf_v2_unigene9019 uagpf v2.0 1145
AutoFact: OB-fold nucleic acid binding domain-containing protein [Arabidopsis thaliana] gb|AEC09877.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis thaliana] 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
uagpf_v2_unigene9450 uagpf v2.0 631
AutoFact: RNA binding protein n=1 Tax=Zea mays RepID=B6T9D3_MAIZE 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
N-terminus
uagpf_v2_unigene12558 uagpf v2.0 675
AutoFact: agenet domain-containing protein [Arabidopsis thaliana] gb|AAY34173.1| At1g09320 [Arabidopsis thaliana] gb|AEE28429.1| agenet domain-containing protein [Arabidopsis thaliana] 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
uagpf_v2_unigene14122 uagpf v2.0 1012
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59923.1| unknown protein [Arabidopsis thaliana] gb|AAM20239.1| unknown protein [Arabidopsis thaliana] gb|AAM62467.1| unkno 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
uagpf_v2_unigene14556 uagpf v2.0 501
AutoFact: agenet domain-containing protein [Arabidopsis thaliana] gb|AAY34173.1| At1g09320 [Arabidopsis thaliana] gb|AEE28429.1| agenet domain-containing protein [Arabidopsis thaliana] 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
uagpf_v2_unigene15646 uagpf v2.0 552
AutoFact: RNA binding protein [Nicotiana sylvestris] gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum] 2.0e-33
Blast2go: rna binding protein 0.0
unknown
uagpf_v2_unigene16564 uagpf v2.0 511
AutoFact: RNA binding protein [Nicotiana sylvestris] gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
N-terminus
uagpf_v2_unigene16944 uagpf v2.0 261
AutoFact: RNA binding protein [Nicotiana sylvestris] gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum] 2.0e-33
Blast2go: rna binding protein 0.0
unknown
uagpf_v2_unigene25317 uagpf v2.0 404
AutoFact: agenet domain-containing protein [Arabidopsis thaliana] gb|AAY34173.1| At1g09320 [Arabidopsis thaliana] gb|AEE28429.1| agenet domain-containing protein [Arabidopsis thaliana] 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Internal
uagpf_v2_unigene25623 uagpf v2.0 551
AutoFact: Agenet domain containing protein 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
N-terminus
uagpf_v2_unigene26617 uagpf v2.0 582
AutoFact: RNA binding protein n=3 Tax=Andropogoneae RepID=B6TN55_MAIZE 0.0
Blast2go: rna binding protein 0.0
unknown
uagpf_v2_unigene27705 uagpf v2.0 557
AutoFact: agenet domain-containing protein [Arabidopsis thaliana] gb|AAY34173.1| At1g09320 [Arabidopsis thaliana] gb|AEE28429.1| agenet domain-containing protein [Arabidopsis thaliana] 7.0e-21
Blast2go: rna binding protein 0.0
unknown
uagpf_v2_unigene27962 uagpf v2.0 394
AutoFact: ENT domain containing protein 6.0e-12
Blast2go: rna binding protein 1.96821e-13
unknown
uagpf_v2_unigene32980 uagpf v2.0 103
AutoFact: putative agenet domain-containing protein [Oryza sativa Japonica Group] dbj|BAD38428.1| putative agenet domain-containing protein [Oryza sativa Japonica Group] gb|EAZ22156.1| hypothetical protein OsJ_05817 [Oryza sativa Japonica Group] dbj|BAG91727.1| unn 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Internal
uagpf_v2_unigene33709 uagpf v2.0 244
AutoFact: Agenet domain containing protein 3.0e-13
Blast2go: rna binding protein 0.0
Coding
uagpf_v2_unigene37572 uagpf v2.0 499
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S4Q9_RICCO 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 2.12572e-25
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain