|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
uagpf_v2_unigene39560
|
uagpf v2.0
|
415
|
|
• AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR
|
4.0e-16
|
|
• FL-Next: tr=Integrase, catalytic region; Ribonuclease H; Medicago truncatula (Barrel medic) (Medicago tribuloides).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
2.88066e-18
|
|
Internal
|
|
uagpf_v2_unigene40173
|
uagpf v2.0
|
260
|
|
• AutoFact: Putative pol polyprotein n=1 Tax=Brassica oleracea var. botrytis RepID=A2T1U5_BRAOB
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene40176
|
uagpf v2.0
|
465
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.10962e-08
|
|
Internal
|
|
uagpf_v2_unigene40541
|
uagpf v2.0
|
411
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=16 Tax=Oryza RepID=Q2R0G5_ORYSJ
|
3.0e-28
|
|
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.82915e-28
|
|
Internal
|
|
uagpf_v2_unigene40565
|
uagpf v2.0
|
377
|
|
• AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ
|
4.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.2164e-22
|
|
N-terminus
|
|
uagpf_v2_unigene41069
|
uagpf v2.0
|
377
|
|
• AutoFact: Copia-type polyprotein, putative; 28768-32772 n=2 Tax=Arabidopsis thaliana RepID=Q9C7Y1_ARATH
|
2.0e-10
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.03513e-10
|
|
Internal
|
|
uagpf_v2_unigene42656
|
uagpf v2.0
|
322
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.35055e-10
|
|
Internal
|
|
uagpf_v2_unigene42666
|
uagpf v2.0
|
331
|
|
• AutoFact: RVT_2 domain containing protein
|
8.0e-12
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
2.96629e-09
|
|
Putative N-terminus
|
|
uagpf_v2_unigene42845
|
uagpf v2.0
|
281
|
|
• AutoFact: Pol polyprotein n=1 Tax=Nosema bombycis RepID=Q1KTA8_NOSBO
|
2.0e-08
|
|
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
4.65274e-10
|
|
Internal
|
|
uagpf_v2_unigene43148
|
uagpf v2.0
|
387
|
|
• AutoFact: similar to Retrovirus-related Pol polyprotein from transposon 297
|
4.0e-05
|
|
• FL-Next: tr=Putative uncharacterized protein Sb10g006600; Sorghum bicolor (Sorghum) (Sorghum vulgare).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
7.13812e-09
|
|
Internal
|
|
uagpf_v2_unigene43619
|
uagpf v2.0
|
238
|
|
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene44138
|
uagpf v2.0
|
335
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=5 Tax=Oryza sativa Japonica Group RepID=Q2QLW7_ORYSJ
|
2.0e-06
|
|
• FL-Next: tr=Putative uncharacterized protein Sb09g007400; Sorghum bicolor (Sorghum) (Sorghum vulgare).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
9.34093e-08
|
|
Internal
|
|
uagpf_v2_unigene45045
|
uagpf v2.0
|
469
|
|
• AutoFact: WS0336.C21_F15 WS-SE-N-A-18 Picea glauca cDNA clone WS0336_F15 3, mRNA sequence.
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Putative C-terminus
|
|
uagpf_v2_unigene45216
|
uagpf v2.0
|
396
|
|
• AutoFact: Putative pol polyprotein n=1 Tax=Brassica oleracea var. botrytis RepID=A2T1U5_BRAOB
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
unknown
|
|
uagpf_v2_unigene45285
|
uagpf v2.0
|
189
|
|
• AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME
|
3.0e-07
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
2.62809e-09
|
|
Internal
|
|
uagpf_v2_unigene45385
|
uagpf v2.0
|
181
|
|
• AutoFact: H0515C11.6 protein n=1 Tax=Oryza sativa RepID=Q01MI5_ORYSA
|
3.0e-06
|
|
• FL-Next: tr=H0515C11.6 protein; Oryza sativa (Rice).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
9.77344e-09
|
|
Putative N-terminus
|
|
uagpf_v2_unigene45434
|
uagpf v2.0
|
397
|
|
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC
|
8.0e-26
|
|
• FL-Next: tr=Polyprotein; Primula vulgaris.
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.53374e-25
|
|
Internal
|
|
uagpf_v2_unigene45473
|
uagpf v2.0
|
337
|
|
• AutoFact: Reverse transcriptase n=1 Tax=Tetraodon nigroviridis RepID=Q76B32_TETNG
|
9.0e-09
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
3.65439e-10
|
|
Internal
|
|
uagpf_v2_unigene45503
|
uagpf v2.0
|
416
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ
|
1.0e-28
|
|
• FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.77155e-34
|
|
Internal
|
|
uagpf_v2_unigene45578
|
uagpf v2.0
|
388
|
|
• AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ
|
1.0e-14
|
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
2.85949e-14
|
|
Internal
|
