|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
uagpf_v2_unigene29626
|
uagpf v2.0
|
355
|
|
• AutoFact: Integrase n=1 Tax=Daphnia pulex RepID=B2CN78_DAPPU
|
2.0e-14
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.09985e-16
|
|
Putative C-terminus
|
|
uagpf_v2_unigene29866
|
uagpf v2.0
|
313
|
|
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME
|
6.0e-16
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
9.72362e-19
|
|
Internal
|
|
uagpf_v2_unigene30018
|
uagpf v2.0
|
435
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Putative C-terminus
|
|
uagpf_v2_unigene32049
|
uagpf v2.0
|
804
|
|
• AutoFact: OSJNBa0035M09.1 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XNY0_ORYSJ
|
1.0e-08
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
6.82585e-09
|
|
Putative Complete
|
|
uagpf_v2_unigene32211
|
uagpf v2.0
|
306
|
|
• AutoFact: PREDICTED: copia protein-like n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI0001DE983F
|
4.0e-09
|
|
• Blast2go: retrotransposon unclassified
|
9.97192e-14
|
|
Coding
|
|
uagpf_v2_unigene32220
|
uagpf v2.0
|
769
|
|
• AutoFact: Putative pol polyprotein n=1 Tax=Brassica oleracea var. botrytis RepID=A2T1U5_BRAOB
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene32444
|
uagpf v2.0
|
353
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QTQ7_ORYSJ
|
2.00386e-43
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene32519
|
uagpf v2.0
|
336
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: sp=Putative ribonuclease H protein At1g65750; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
7.99195e-14
|
|
Internal
|
|
uagpf_v2_unigene32583
|
uagpf v2.0
|
445
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ
|
2.0e-21
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
3.38295e-21
|
|
Internal
|
|
uagpf_v2_unigene33151
|
uagpf v2.0
|
318
|
|
• AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Oryza sativa Japonica Group RepID=Q8H807_ORYSJ
|
1.0e-06
|
|
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.01041e-07
|
|
Internal
|
|
uagpf_v2_unigene33859
|
uagpf v2.0
|
452
|
|
• AutoFact: Putative retroelement n=1 Tax=Oryza sativa Japonica Group RepID=Q8LM84_ORYSJ
|
7.0e-07
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
3.06608e-08
|
|
Internal
|
|
uagpf_v2_unigene34019
|
uagpf v2.0
|
474
|
|
• AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR
|
2.0e-27
|
|
• FL-Next: tr=Integrase, catalytic region; Ribonuclease H; Medicago truncatula (Barrel medic) (Medicago tribuloides).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
5.18466e-31
|
|
Internal
|
|
uagpf_v2_unigene34737
|
uagpf v2.0
|
393
|
|
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC
|
1.0e-27
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
3.01564e-32
|
|
Complete
|
|
uagpf_v2_unigene34758
|
uagpf v2.0
|
210
|
|
• AutoFact: integrase [Oryza officinalis]
|
3.0e-08
|
|
• FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
4.71747e-11
|
|
Internal
|
|
uagpf_v2_unigene35099
|
uagpf v2.0
|
297
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q2R1K6_ORYSJ
|
1.0e-06
|
|
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
3.68974e-09
|
|
Internal
|
|
uagpf_v2_unigene36834
|
uagpf v2.0
|
426
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10NE5_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Putative C-terminus
|
|
uagpf_v2_unigene37880
|
uagpf v2.0
|
443
|
|
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME
|
5.0e-32
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.4665e-36
|
|
Internal
|
|
uagpf_v2_unigene39031
|
uagpf v2.0
|
293
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10NE5_ORYSJ
|
1.0e-26
|
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.03321e-32
|
|
Internal
|
|
uagpf_v2_unigene39333
|
uagpf v2.0
|
395
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q53PH7_ORYSJ
|
3.0e-07
|
|
• Blast2go: retrotransposon unclassified
|
2.64424e-13
|
|
unknown
|
|
uagpf_v2_unigene39460
|
uagpf v2.0
|
471
|
|
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ
|
4.0e-17
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
5.19078e-18
|
|
Internal
|
