|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
uagpf_v2_unigene4224
|
uagpf v2.0
|
781
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
1.207e-18
|
|
Putative Complete
|
|
uagpf_v2_unigene10074
|
uagpf v2.0
|
435
|
|
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q8LNW7_ORYSJ
|
2.0e-12
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
7.47815e-14
|
|
Internal
|
|
uagpf_v2_unigene16292
|
uagpf v2.0
|
798
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEC4_ORYSJ
|
2.0e-09
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
1.18434e-10
|
|
N-terminus
|
|
uagpf_v2_unigene34327
|
uagpf v2.0
|
238
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QYR7_ORYSJ
|
9.0e-10
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00300; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
1.74658e-09
|
|
Putative C-terminus
|
|
uagpf_v2_unigene34862
|
uagpf v2.0
|
308
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QUS2_ORYSJ
|
1.0e-15
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
6.96525e-16
|
|
Internal
|
|
uagpf_v2_unigene35603
|
uagpf v2.0
|
189
|
|
• AutoFact: rve domain containing protein
|
4.0e-07
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
3.36647e-28
|
|
Internal
|
|
uagpf_v2_unigene40650
|
uagpf v2.0
|
408
|
|
• AutoFact: RVT_2 domain containing protein
|
1.0e-17
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
2.07451e-18
|
|
N-terminus
|
|
uagpf_v2_unigene40706
|
uagpf v2.0
|
356
|
|
• AutoFact: Putaive copia-like retrotransposon polyprotein, 5'-partial (Fragment) n=2 Tax=Oryza sativa RepID=Q8W5D1_ORYSA
|
2.0e-10
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
1.64456e-12
|
|
Internal
|
|
uagpf_v2_unigene46653
|
uagpf v2.0
|
341
|
|
• AutoFact: Polyprotein-like n=1 Tax=Solanum chilense RepID=Q9AU17_SOLCI
|
1.0e-19
|
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
1.06434e-22
|
|
N-terminus
|
|
uagpf_v2_unigene46864
|
uagpf v2.0
|
424
|
|
• AutoFact: WS01020.B21_L11 SS-R-N-A-11 Picea sitchensis cDNA clone WS01020_L11 3', mRNA sequence.
|
1.0e-32
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
1.91919e-21
|
|
Internal
|
|
uagpf_v2_unigene47307
|
uagpf v2.0
|
358
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ
|
1.0e-24
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
2.00223e-28
|
|
Internal
|
|
uagpf_v2_unigene48314
|
uagpf v2.0
|
344
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEC4_ORYSJ
|
2.0e-09
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
1.18434e-10
|
|
Coding
|
|
uagpf_v2_unigene48378
|
uagpf v2.0
|
314
|
|
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN
|
3.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
1.29927e-24
|
|
Internal
|
|
uagpf_v2_unigene51804
|
uagpf v2.0
|
360
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
1.207e-18
|
|
Putative C-terminus
|
|
uagpf_v2_unigene55960
|
uagpf v2.0
|
243
|
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene55979
|
uagpf v2.0
|
387
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QYR7_ORYSJ
|
2.0e-14
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
8.31534e-15
|
|
Internal
|
