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Assembly Name: uagpf v2.0

Name: transmembrane protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene5301 uagpf v2.0 697
AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
N-terminus
uagpf_v2_unigene5919 uagpf v2.0 449
AutoFact: [S] COG2119 Predicted membrane protein 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
C-terminus
uagpf_v2_unigene9713 uagpf v2.0 735
AutoFact: DUF778 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
Putative C-terminus
uagpf_v2_unigene10345 uagpf v2.0 496
AutoFact: CytochromB561_N domain containing protein 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transmembrane protein 5.08816e-08
N-terminus
uagpf_v2_unigene13573 uagpf v2.0 496
AutoFact: DUF962 domain containing protein 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
C-terminus
uagpf_v2_unigene14718 uagpf v2.0 1355
AutoFact: Rab5-interacting family protein [Arabidopsis thaliana] gb|AAK32862.1|AF361850_1 AT5g49540/K6M13_9 [Arabidopsis thaliana] gb|AAM91062.1| AT5g49540/K6M13_9 [Arabidopsis thaliana] gb|AED95827.1| Rab5-interacting family protein [Arabidopsis thaliana] 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
Complete
uagpf_v2_unigene15208 uagpf v2.0 520
AutoFact: DUF778 domain containing protein 0.0
Blast2go: transmembrane protein 0.0
unknown
uagpf_v2_unigene15366 uagpf v2.0 1045
AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
C-terminus
uagpf_v2_unigene18007 uagpf v2.0 709
AutoFact: Predicted membrane protein n=4 Tax=Malpighiales RepID=B9HWL1_POPTR 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
C-terminus
uagpf_v2_unigene18675 uagpf v2.0 2101
AutoFact: WS02836.CR_K07 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02836_K07 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transmembrane protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain