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Assembly Name: uagpf v2.0

Name: rna-binding protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1070 uagpf v2.0 368
AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
Blast2go: rna-binding protein 0.0
unknown
uagpf_v2_unigene4951 uagpf v2.0 535
AutoFact: putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group] dbj|BAD82096.1| putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group] gb|EAY76689.1| hypothetical protein OsI_04643 [Oryza sativa Indica Group] gb|EAZ14353.1| hypothetical p 0.0
Blast2go: rna-binding protein 0.0
unknown
uagpf_v2_unigene5423 uagpf v2.0 1035
AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
C-terminus
uagpf_v2_unigene5592 uagpf v2.0 1186
AutoFact: protein localized in the nucleoli of pea nuclei; ORF; putative [Pisum sativum] 1.0e-33
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: rna-binding protein 8.16201e-38
Putative C-terminus
uagpf_v2_unigene6047 uagpf v2.0 1965
AutoFact: putative RNA-binding like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
uagpf_v2_unigene7094 uagpf v2.0 1405
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
uagpf_v2_unigene7644 uagpf v2.0 545
AutoFact: Putative RRM-containing protein SEB-4 n=3 Tax=Poaceae RepID=Q5N8W4_ORYSJ 0.0
Blast2go: rna-binding protein 0.0
unknown
uagpf_v2_unigene9949 uagpf v2.0 258
AutoFact: Heterogeneous nuclear ribonucleoprotein A3-like protein 2 n=3 Tax=Andropogoneae RepID=B6TV58_MAIZE 0.0
Blast2go: rna-binding protein 0.0
unknown
uagpf_v2_unigene12252 uagpf v2.0 799
AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 1.68156e-44
Putative Complete
uagpf_v2_unigene13311 uagpf v2.0 1090
AutoFact: Putative RRM-containing protein SEB-4 n=3 Tax=Poaceae RepID=Q5N8W4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Putative Complete
uagpf_v2_unigene14201 uagpf v2.0 760
AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
Blast2go: rna-binding protein 1.68156e-44
Putative coding
uagpf_v2_unigene14951 uagpf v2.0 1113
AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 1.68156e-44
Complete
uagpf_v2_unigene14957 uagpf v2.0 948
AutoFact: putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group] dbj|BAD82096.1| putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group] gb|EAY76689.1| hypothetical protein OsI_04643 [Oryza sativa Indica Group] gb|EAZ14353.1| hypothetical p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Putative Complete
uagpf_v2_unigene15022 uagpf v2.0 604
AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
Blast2go: rna-binding protein 0.0
Coding
uagpf_v2_unigene15183 uagpf v2.0 757
AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
Blast2go: rna-binding protein 1.68156e-44
Coding
uagpf_v2_unigene15295 uagpf v2.0 571
AutoFact: Putative RRM-containing protein SEB-4 n=3 Tax=Poaceae RepID=Q5N8W4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Putative C-terminus
uagpf_v2_unigene15469 uagpf v2.0 1989
AutoFact: Heterogeneous nuclear ribonucleoprotein A3-like protein 2 n=3 Tax=Andropogoneae RepID=B6TV58_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
uagpf_v2_unigene15842 uagpf v2.0 687
AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
Blast2go: rna-binding protein 0.0
Coding
uagpf_v2_unigene17980 uagpf v2.0 1763
AutoFact: oligouridylate binding protein-like protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
uagpf_v2_unigene25533 uagpf v2.0 295
AutoFact: Ribonucleoprotein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RAR1_RICCO 5.0e-21
Blast2go: rna-binding protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain