Sustainpine_db
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Assembly Name: uagpf v2.0

Name: rna-binding protein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene25922 uagpf v2.0 353
• AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
• Blast2go: rna-binding protein 0.0
Coding
uagpf_v2_unigene27746 uagpf v2.0 494
• AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
• Blast2go: rna-binding protein 0.0
Coding
uagpf_v2_unigene28024 uagpf v2.0 486
• AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
• Blast2go: rna-binding protein 0.0
Coding
uagpf_v2_unigene29274 uagpf v2.0 342
• AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
• Blast2go: rna-binding protein 0.0
Putative coding
uagpf_v2_unigene30151 uagpf v2.0 123
• AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
• Blast2go: rna-binding protein 0.0
unknown
uagpf_v2_unigene30495 uagpf v2.0 349
• AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
• Blast2go: rna-binding protein 0.0
unknown
uagpf_v2_unigene30594 uagpf v2.0 567
• AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Blast2go: rna-binding protein 1.68156e-44
Internal
uagpf_v2_unigene36496 uagpf v2.0 490
• AutoFact: Putative RRM-containing protein SEB-4 n=3 Tax=Poaceae RepID=Q5N8W4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-binding protein 0.0
C-terminus
uagpf_v2_unigene36561 uagpf v2.0 488
• AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
• Blast2go: rna-binding protein 0.0
Coding
uagpf_v2_unigene37081 uagpf v2.0 480
• AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-binding protein 0.0
N-terminus
uagpf_v2_unigene40514 uagpf v2.0 357
• AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-binding protein 0.0
Internal
uagpf_v2_unigene50528 uagpf v2.0 350
• AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-binding protein 0.0
C-terminus
uagpf_v2_unigene51335 uagpf v2.0 341
• AutoFact: Putative RNA-binding protein (Fragment) n=1 Tax=Larix laricina RepID=Q9XEZ5_LARLA 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-binding protein 4.25404e-08
C-terminus
uagpf_v2_unigene52767 uagpf v2.0 520
• AutoFact: Heterogeneous nuclear ribonucleoprotein A3-like protein 2 n=3 Tax=Andropogoneae RepID=B6TV58_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-binding protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain