Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: methyl binding domain protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1790 uagpf v2.0 494
AutoFact: Methyl binding domain protein n=1 Tax=Populus trichocarpa RepID=B9HPH2_POPTR 2.0e-13
Blast2go: methyl binding domain protein 2.64407e-15
Coding
uagpf_v2_unigene3127 uagpf v2.0 317
AutoFact: methyl-CPG-binding domain protein 5 [Arabidopsis thaliana] sp|Q9SNC0.1|MBD5_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 5; Short=AtMBD5; Short=MBD05; AltName: Full=Methyl-CpG-binding protein MBD5 emb|CAB62328.1| putative protein [Arab 3.0e-13
FL-Next: tr=Methyl binding domain protein; subsp. trichocarpa). 0.0
Blast2go: methyl binding domain protein 1.7833e-22
Internal
uagpf_v2_unigene15030 uagpf v2.0 537
AutoFact: methyl-CPG-binding domain protein 5 [Arabidopsis thaliana] sp|Q9SNC0.1|MBD5_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 5; Short=AtMBD5; Short=MBD05; AltName: Full=Methyl-CpG-binding protein MBD5 emb|CAB62328.1| putative protein [Arab 3.0e-13
FL-Next: sp=Methyl-CpG-binding domain-containing protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 1.7833e-22
Putative N-terminus
uagpf_v2_unigene19276 uagpf v2.0 740
AutoFact: Methyl-CpG-binding domain-containing protein 5 n=2 Tax=Arabidopsis RepID=MBD5_ARATH 5.0e-15
FL-Next: sp=Methyl-CpG-binding domain-containing protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 5.90533e-18
Putative Complete
uagpf_v2_unigene25474 uagpf v2.0 315
AutoFact: Unassigned protein
Blast2go: methyl binding domain protein 2.07723e-35
unknown
uagpf_v2_unigene30023 uagpf v2.0 568
AutoFact: putative methyl-binding domain protein [Cryptomeria japonica] 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl binding domain protein 3.71356e-20
N-terminus
uagpf_v2_unigene33062 uagpf v2.0 198
AutoFact: putative methyl-binding domain protein [Cryptomeria japonica] 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl binding domain protein 3.71356e-20
Internal
uagpf_v2_unigene40667 uagpf v2.0 417
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 0.0
Blast2go: methyl binding domain protein 2.07723e-35
Internal
uagpf_v2_unigene47986 uagpf v2.0 380
AutoFact: methyl-CPG-binding domain 8 [Arabidopsis thaliana] sp|Q9LME6.1|MBD8_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 8; Short=AtMBD8; Short=MBD08; AltName: Full=Methyl-CpG-binding protein MBD8 gb|AAF87260.1|AC068562_7 Contains a Methyl-CpG 2.0e-06
Blast2go: methyl binding domain protein 3.04398e-14
Coding
uagpf_v2_unigene48203 uagpf v2.0 164
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3M7_RICCO 1.0e-08
Blast2go: methyl binding domain protein 3.12678e-10
unknown
uagpf_v2_unigene51850 uagpf v2.0 219
AutoFact: methyl-CPG-binding domain protein 5 [Arabidopsis thaliana] sp|Q9SNC0.1|MBD5_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 5; Short=AtMBD5; Short=MBD05; AltName: Full=Methyl-CpG-binding protein MBD5 emb|CAB62328.1| putative protein [Arab 3.0e-13
Blast2go: methyl binding domain protein 1.7833e-22
Putative coding

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain