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Assembly Name: uagpf v2.0

Name: gag-pol polyprotein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene46982 uagpf v2.0 339
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 4.0e-30
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 8.94806e-30
Internal
uagpf_v2_unigene47411 uagpf v2.0 432
AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Blast2go: gag-pol polyprotein 1.02965e-23
Internal
uagpf_v2_unigene47448 uagpf v2.0 370
AutoFact: Putative gag-pol polyprotein n=1 Tax=Triticum monococcum subsp. aegilopoides RepID=B5G4Y0_TRIMO 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Blast2go: gag-pol polyprotein 2.6253e-29
Internal
uagpf_v2_unigene47668 uagpf v2.0 364
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 2.0e-24
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 3.59987e-24
Internal
uagpf_v2_unigene47900 uagpf v2.0 304
AutoFact: Os09g0491900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0J0N1_ORYSJ 8.0e-09
FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: gag-pol polyprotein 1.27957e-10
Internal
uagpf_v2_unigene48095 uagpf v2.0 494
AutoFact: Os09g0491900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0J0N1_ORYSJ 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 1.36805e-15
Putative Complete
uagpf_v2_unigene48999 uagpf v2.0 343
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 5.0e-07
FL-Next: tr=Gag-pol polyprotein; Silene latifolia (White campion) (Bladder campion). 0.0
Blast2go: gag-pol polyprotein 9.11952e-07
Internal
uagpf_v2_unigene49178 uagpf v2.0 351
AutoFact: Gag-pol polyprotein (Fragment) n=1 Tax=Panicum virgatum RepID=A4GMN5_9POAL 5.0e-19
FL-Next: tr=Putative unclassified retrotransposon protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: gag-pol polyprotein 1.69631e-23
Internal
uagpf_v2_unigene49801 uagpf v2.0 429
AutoFact: OSJNBa0017P10.4 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XQ51_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative Complete
uagpf_v2_unigene50059 uagpf v2.0 361
AutoFact: F5K24.1 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPF9_ARATH 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: gag-pol polyprotein 7.86305e-28
Putative N-terminus
uagpf_v2_unigene51533 uagpf v2.0 459
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 9.94922e-44
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
C-terminus
uagpf_v2_unigene51758 uagpf v2.0 218
AutoFact: polyprotein [Candida glabrata] 3.0e-18
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: gag-pol polyprotein 1.18877e-21
C-terminus
uagpf_v2_unigene51772 uagpf v2.0 379
AutoFact: OSJNBa0017P10.4 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XQ51_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative Complete
uagpf_v2_unigene52326 uagpf v2.0 418
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
uagpf_v2_unigene52389 uagpf v2.0 388
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 1.20944e-31
N-terminus
uagpf_v2_unigene52492 uagpf v2.0 241
AutoFact: F5K24.1 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPF9_ARATH 7.0e-26
Blast2go: gag-pol polyprotein 3.29e-29
unknown
uagpf_v2_unigene53165 uagpf v2.0 356
AutoFact: Putative Zea mays retrotransposon Opie-2 n=2 Tax=Oryza sativa Japonica Group RepID=Q8H7T1_ORYSJ 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 4.64832e-24
Putative N-terminus
uagpf_v2_unigene54210 uagpf v2.0 654
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
Blast2go: gag-pol polyprotein 0.0
unknown
uagpf_v2_unigene55730 uagpf v2.0 373
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative C-terminus
uagpf_v2_unigene55743 uagpf v2.0 558
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain