Sustainpine_db
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Assembly Name: uagpf v2.0

Name: pentatricopeptide repeat-containing protein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene49 uagpf v2.0 378
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T2X9_RICCO 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g59040; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene484 uagpf v2.0 457
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RV44_RICCO 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.89981e-42
Internal
uagpf_v2_unigene552 uagpf v2.0 350
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22470, mitochondrial; Flags: Precursor gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana] dbj|BAD43091.1| 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.42358e-29
Internal
uagpf_v2_unigene1077 uagpf v2.0 1286
• AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
uagpf_v2_unigene1170 uagpf v2.0 731
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STF9.1|PP266_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46870 emb|CAB51178.1| putative protein [Arabidopsis thaliana] dbj|BAC42475.1| unknown protein [Arabido 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene1324 uagpf v2.0 469
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62470, mitochondrial; Flags: Precursor emb|CAB82961.1| putative protein [Arabidopsis thaliana] gb|AAQ6 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
unknown
uagpf_v2_unigene1448 uagpf v2.0 1777
• AutoFact: Pentatricopeptide repeat-containing protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GB98_CUCME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative Complete
uagpf_v2_unigene1583 uagpf v2.0 651
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230 gb|AAC98044.1| unknown protein [Arabidopsis thaliana] gb|AAO64144.1| unknown protein [Arabidopsi 4.0e-37
• Blast2go: pentatricopeptide repeat-containing protein 1.4013e-45
Putative coding
uagpf_v2_unigene1828 uagpf v2.0 472
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene1941 uagpf v2.0 643
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RF13_RICCO 8.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene2268 uagpf v2.0 819
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 6.58264e-22
C-terminus
uagpf_v2_unigene2428 uagpf v2.0 500
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q5XET4.1|PP142_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01860; AltName: Full=Protein EMBRYO DEFECTIVE 975 gb|AAU95418.1| At2g01860 [Arabidopsis thaliana] gb|A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene2752 uagpf v2.0 612
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FZD1.1|PPR58_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g26460, mitochondrial; Flags: Precursor gb|AAF98572.1|AC013427_15 Contains similarity to a hypothetical 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g26460, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene2893 uagpf v2.0 803
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FZD1.1|PPR58_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g26460, mitochondrial; Flags: Precursor gb|AAF98572.1|AC013427_15 Contains similarity to a hypothetical 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
uagpf_v2_unigene3421 uagpf v2.0 551
• AutoFact: DYW8 protein (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q9M4P5_ARATH 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.485e-19
Putative N-terminus
uagpf_v2_unigene3615 uagpf v2.0 687
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S2U8_RICCO 8.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
N-terminus
uagpf_v2_unigene3839 uagpf v2.0 726
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FME4.1|PP438_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g60960, mitochondrial; Flags: Precursor dbj|BAB10645.1| unnamed protein product [Arabidopsis thaliana] 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative coding
uagpf_v2_unigene3973 uagpf v2.0 663
• AutoFact: Vacuolar sorting protein 9 (VPS9) domain protein [Arabidopsis thaliana] emb|CAC05458.1| putative protein [Arabidopsis thaliana] gb|AED91374.1| Vacuolar sorting protein 9 (VPS9) domain protein [Arabidopsis thaliana] 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene4075 uagpf v2.0 572
• AutoFact: pfam12854, PPR_1, PPR repeat 4.0e-06
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative coding
uagpf_v2_unigene4091 uagpf v2.0 486
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900 gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain