Sustainpine_db
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Assembly Name: uagpf v2.0

Name: pentatricopeptide repeat-containing protein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene41352 uagpf v2.0 538
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 3.0e-09
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g59040; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.77376e-16
N-terminus
uagpf_v2_unigene41464 uagpf v2.0 280
• AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene41535 uagpf v2.0 406
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040, mitochondrial; Flags: Precursor gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thal 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.06632e-34
Internal
uagpf_v2_unigene41937 uagpf v2.0 142
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O49343.1|PP177_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g30780 gb|AAC02749.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF00380.1| hypothetical protein 3.0e-13
• Blast2go: pentatricopeptide repeat-containing protein 1.32873e-28
unknown
uagpf_v2_unigene42055 uagpf v2.0 196
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9ZUT5.1|PP191_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37310 gb|AAC98051.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF02175.1| hypothetical protein 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 8.24913e-10
Internal
uagpf_v2_unigene42185 uagpf v2.0 291
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35030, mitochondrial; Flags: Precursor gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana] gb|A 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.698e-34
Internal
uagpf_v2_unigene42250 uagpf v2.0 479
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8LPS6.2|PPR3_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02150 gb|AAC24372.1| Unknown protein [Arabidopsis thaliana] gb|AEE27393.1| pentatricopeptide repeat-con 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene42889 uagpf v2.0 265
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
N-terminus
uagpf_v2_unigene42892 uagpf v2.0 260
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g14820, mitochondrial; Flags: Precursor emb|CAC01881.1| putative protein [Arabidopsis thaliana] gb|AED9 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.55216e-20
Internal
uagpf_v2_unigene43254 uagpf v2.0 232
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53360, mitochondrial; Flags: Precursor emb|CAB67643.1| putative protein [Arabidopsis thaliana] gb|AEE7 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.97802e-19
Internal
uagpf_v2_unigene43279 uagpf v2.0 281
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 9.78112e-27
Internal
uagpf_v2_unigene43303 uagpf v2.0 268
• AutoFact: Unassigned protein
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g18110, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 9.83456e-10
Internal
uagpf_v2_unigene43462 uagpf v2.0 365
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230 dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana] gb|ABE66219.1| pentatricope 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.90896e-36
Internal
uagpf_v2_unigene43507 uagpf v2.0 310
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At1g68930 gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana] gb|AEE34864.1| pen 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.98902e-22
Internal
uagpf_v2_unigene43630 uagpf v2.0 276
• AutoFact: PPR domain containing protein 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.28463e-27
Internal
uagpf_v2_unigene43689 uagpf v2.0 297
• AutoFact: similar to N. tabacum membrane-associated salt-inducible protein (PID:g473874) [Arabidopsis thaliana] 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.13844e-27
Putative N-terminus
uagpf_v2_unigene43693 uagpf v2.0 272
• AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 4.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.97205e-08
C-terminus
uagpf_v2_unigene43943 uagpf v2.0 205
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STF9.1|PP266_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46870 emb|CAB51178.1| putative protein [Arabidopsis thaliana] dbj|BAC42475.1| unknown protein [Arabido 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene44050 uagpf v2.0 279
• AutoFact: Pentatricopeptide repeat protein 98 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE3_FUNHY 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.81873e-14
N-terminus
uagpf_v2_unigene44087 uagpf v2.0 160
• AutoFact: Pentatricopeptide repeat n=1 Tax=Medicago truncatula RepID=Q2HUC1_MEDTR 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 7.36102e-21
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain