Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: pentatricopeptide repeat-containing protein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene34905 uagpf v2.0 361
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900 gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene35269 uagpf v2.0 184
• AutoFact: Homologue to restoring pentatricopeptide repeat protein n=1 Tax=Raphanus sativus RepID=D0R6K3_RAPSA 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.65897e-16
Internal
uagpf_v2_unigene35533 uagpf v2.0 418
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQ16_RICCO 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.10029e-20
Internal
uagpf_v2_unigene35996 uagpf v2.0 366
• AutoFact: Pentatricopeptide repeat-containing protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBB3_CUCME 5.0e-10
• Blast2go: pentatricopeptide repeat-containing protein 3.41765e-11
unknown
uagpf_v2_unigene36327 uagpf v2.0 356
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S6R2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene36369 uagpf v2.0 436
• AutoFact: Unassigned protein
• Blast2go: pentatricopeptide repeat-containing protein 4.08008e-11
unknown
uagpf_v2_unigene37031 uagpf v2.0 369
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_52.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQD3_VITVI 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 5.56937e-26
Internal
uagpf_v2_unigene37326 uagpf v2.0 190
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.72004e-15
Internal
uagpf_v2_unigene37538 uagpf v2.0 364
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At5g65820 dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana] gb|AED98111.1| pentatric 9.0e-22
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g49730; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.24205e-28
Putative C-terminus
uagpf_v2_unigene37658 uagpf v2.0 486
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene37739 uagpf v2.0 522
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene38131 uagpf v2.0 223
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900 gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene38142 uagpf v2.0 332
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.32432e-17
C-terminus
uagpf_v2_unigene38264 uagpf v2.0 289
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SQU6.1|PP216_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06430, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 2750; Flags: Precursor gb|AAF08573.1|AC01 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 5.87714e-31
Putative N-terminus
uagpf_v2_unigene38472 uagpf v2.0 448
• AutoFact: Unassigned protein
• Blast2go: pentatricopeptide repeat-containing protein 7.3042e-19
Coding
uagpf_v2_unigene38862 uagpf v2.0 313
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520 dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana] gb|AED98224.1| pentatricope 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.61936e-08
Internal
uagpf_v2_unigene38882 uagpf v2.0 558
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g14820, mitochondrial; Flags: Precursor emb|CAC01881.1| putative protein [Arabidopsis thaliana] gb|AED9 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.46025e-32
C-terminus
uagpf_v2_unigene38982 uagpf v2.0 444
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9REV6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene38998 uagpf v2.0 290
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 7.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 7.15973e-30
Putative C-terminus
uagpf_v2_unigene39026 uagpf v2.0 543
• AutoFact: Vacuolar sorting protein 9 (VPS9) domain protein [Arabidopsis thaliana] emb|CAC05458.1| putative protein [Arabidopsis thaliana] gb|AED91374.1| Vacuolar sorting protein 9 (VPS9) domain protein [Arabidopsis thaliana] 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain