Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: pentatricopeptide repeat-containing protein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene29871 uagpf v2.0 386
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STF9.1|PP266_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46870 emb|CAB51178.1| putative protein [Arabidopsis thaliana] dbj|BAC42475.1| unknown protein [Arabido 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene30225 uagpf v2.0 338
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53700, chloroplastic; AltName: Full=Protein MATERNAL EFFECT EMBRYO ARREST 40; Flags: Precursor emb|CAB 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 9.20625e-22
Internal
uagpf_v2_unigene30462 uagpf v2.0 269
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S6R2_RICCO 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
unknown
uagpf_v2_unigene30564 uagpf v2.0 361
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8VYR5.1|PP351_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g35850, mitochondrial; Flags: Precursor gb|AAL49827.1| unknown protein [Arabidopsis thaliana] gb|AAM142 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At4g35850, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
uagpf_v2_unigene30612 uagpf v2.0 372
• AutoFact: glutamine-rich protein 23 [Arabidopsis thaliana] sp|Q9SY69.1|PPR29_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g10270; AltName: Full=Protein GLUTAMINE-RICH PROTEIN 23 gb|AAD32877.1|AC005489_15 F14N23.15 [Arabidopsis thaliana] gb|AEE 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.52015e-34
Internal
uagpf_v2_unigene30659 uagpf v2.0 413
• AutoFact: Pentatricopeptide repeat-containing protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBB3_CUCME 3.0e-09
• Blast2go: pentatricopeptide repeat-containing protein 7.20373e-37
unknown
uagpf_v2_unigene30698 uagpf v2.0 382
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene31422 uagpf v2.0 677
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE 2217; Flags: Precursor gb|AAD30226.1|AC00 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene31651 uagpf v2.0 515
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAL07224.1| unknown protein [Arabidopsis thaliana] gb|AEE84182.1| pentatricopeptide repeat-contain 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene31797 uagpf v2.0 384
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9S733.1|PP196_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40240, mitochondrial; Flags: Precursor gb|AAD25939.1|AF085279_12 hypothetical protein [Arabidopsis tha 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene32507 uagpf v2.0 507
• AutoFact: mitochondrial editing factor 22 [Arabidopsis thaliana] sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770 dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana] gb|AEE75244.1| mitochondrial editing fa 1.0e-10
• Blast2go: pentatricopeptide repeat-containing protein 6.75869e-12
Putative coding
uagpf_v2_unigene32994 uagpf v2.0 339
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.68581e-26
Putative N-terminus
uagpf_v2_unigene33329 uagpf v2.0 262
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FME4.1|PP438_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g60960, mitochondrial; Flags: Precursor dbj|BAB10645.1| unnamed protein product [Arabidopsis thaliana] 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative coding
uagpf_v2_unigene33523 uagpf v2.0 462
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene33967 uagpf v2.0 397
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_52.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQD3_VITVI 2.0e-23
• Blast2go: pentatricopeptide repeat-containing protein 5.56937e-26
unknown
uagpf_v2_unigene34123 uagpf v2.0 332
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SPI6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene34180 uagpf v2.0 375
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9S733.1|PP196_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40240, mitochondrial; Flags: Precursor gb|AAD25939.1|AF085279_12 hypothetical protein [Arabidopsis tha 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene34721 uagpf v2.0 234
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LVF9.1|PP245_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g21470 dbj|BAB02341.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76513.1| pentatricopeptide 2.0e-06
• Blast2go: pentatricopeptide repeat-containing protein 5.78029e-07
Putative coding
uagpf_v2_unigene34732 uagpf v2.0 224
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P0C7R4.1|PP110_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g69290 gb|AEE34906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g69290; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene34792 uagpf v2.0 428
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RW52_RICCO 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain