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Assembly Name: uagpf v2.0

Name: dna binding

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene444 uagpf v2.0 819
AutoFact: PREDICTED: ripening-related bZIP protein-like isoform 2 [Vitis vinifera] ref|XP_002284785.1| PREDICTED: ripening-related bZIP protein-like isoform 1 [Vitis vinifera] emb|CAB85632.1| putative ripening-related bZIP protein [Vitis vinifera] 2.0e-38
FL-Next: sp=ABSCISIC ACID-INSENSITIVE 5-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 0.0
N-terminus
uagpf_v2_unigene665 uagpf v2.0 723
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
uagpf_v2_unigene1024 uagpf v2.0 379
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9REN7_RICCO 5.0e-13
Blast2go: dna binding 5.09583e-15
Coding
uagpf_v2_unigene1090 uagpf v2.0 935
AutoFact: pfam03763, Remorin_C, Remorin, C-terminal region 7.9874e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene1255 uagpf v2.0 1490
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene1497 uagpf v2.0 410
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9STX4_RICCO 0.0
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene1537 uagpf v2.0 440
AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 0.0
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene1566 uagpf v2.0 963
AutoFact: PTEN_C2 multi-domain protein 6.0e-37
FL-Next: sp=Formin-like protein 3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene1777 uagpf v2.0 1023
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
uagpf_v2_unigene2079 uagpf v2.0 475
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDQ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
N-terminus
uagpf_v2_unigene2136 uagpf v2.0 699
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SSC2_RICCO 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 5.43334e-30
C-terminus
uagpf_v2_unigene2583 uagpf v2.0 414
AutoFact: Unassigned protein
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene3169 uagpf v2.0 904
AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 2.0e-05
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene3396 uagpf v2.0 447
AutoFact: transcription factor bHLH118 [Arabidopsis thaliana] sp|Q9STJ7.1|BH118_ARATH RecName: Full=Transcription factor bHLH118; AltName: Full=Basic helix-loop-helix protein 118; Short=AtbHLH118; Short=bHLH 118; AltName: Full=Transcription factor EN 5; AltName: Fu 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene3581 uagpf v2.0 580
AutoFact: abscisic acid responsive element-binding protein 2 [Populus suaveolens] 9.0e-35
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene4622 uagpf v2.0 478
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RY52_RICCO 0.0
FL-Next: sp=PHD finger protein At1g33420; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene5074 uagpf v2.0 827
AutoFact: putative AT-hook DNA-binding protein [Oryza sativa Japonica Group] gb|EAZ07603.1| hypothetical protein OsI_29854 [Oryza sativa Indica Group] 5.60519e-45
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene5437 uagpf v2.0 596
AutoFact: Unassigned protein
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene7270 uagpf v2.0 332
AutoFact: pfam03763, Remorin_C, Remorin, C-terminal region 7.9874e-44
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene7562 uagpf v2.0 525
AutoFact: PHD domain containing protein 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 2.60232e-39
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain