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Assembly Name: uagpf v2.0

Name: dna binding

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene38973 uagpf v2.0 230
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 2.45307e-18
Internal
uagpf_v2_unigene39146 uagpf v2.0 340
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 1.23916e-18
Internal
uagpf_v2_unigene39385 uagpf v2.0 346
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene39572 uagpf v2.0 375
AutoFact: DUF3594 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene40292 uagpf v2.0 322
AutoFact: MYB transcription factor [Hevea brasiliensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
N-terminus
uagpf_v2_unigene40306 uagpf v2.0 361
AutoFact: DUF659 domain containing protein 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 1.70282e-18
Internal
uagpf_v2_unigene40659 uagpf v2.0 544
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene40867 uagpf v2.0 328
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene41649 uagpf v2.0 281
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SSC2_RICCO 8.0e-25
Blast2go: dna binding 5.43334e-30
Coding
uagpf_v2_unigene43075 uagpf v2.0 270
AutoFact: PHD-finger family protein n=1 Tax=Zea mays RepID=B6SV09_MAIZE 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 3.22506e-19
Internal
uagpf_v2_unigene43622 uagpf v2.0 263
AutoFact: RNA polymerase III RPC4 [Arabidopsis thaliana] emb|CAC05464.1| putative protein [Arabidopsis thaliana] gb|AED91384.1| RNA polymerase III RPC4 [Arabidopsis thaliana] 1.0e-29
Blast2go: dna binding 1.69445e-41
unknown
uagpf_v2_unigene44727 uagpf v2.0 335
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 2.68818e-13
Putative N-terminus
uagpf_v2_unigene45387 uagpf v2.0 252
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RY52_RICCO 0.0
Blast2go: dna binding 0.0
Putative coding
uagpf_v2_unigene47606 uagpf v2.0 274
AutoFact: Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] gb|AEE76957.1| Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] 9.0e-06
Blast2go: dna binding 3.85409e-17
unknown
uagpf_v2_unigene47631 uagpf v2.0 387
AutoFact: DNA binding protein, putative n=2 Tax=Ricinus communis RepID=B9T5M6_RICCO 1.0e-09
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna binding 7.03792e-11
Internal
uagpf_v2_unigene47888 uagpf v2.0 299
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S4Y0_RICCO 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 2.74428e-16
C-terminus
uagpf_v2_unigene51188 uagpf v2.0 668
AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 2.0e-05
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene52222 uagpf v2.0 362
AutoFact: putative AT-hook DNA-binding protein [Oryza sativa Japonica Group] gb|EAZ07603.1| hypothetical protein OsI_29854 [Oryza sativa Indica Group] 5.60519e-45
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene52593 uagpf v2.0 332
AutoFact: protein alfin-like 3 [Arabidopsis thaliana] emb|CAB87196.1| nucleic acid binding protein-like [Arabidopsis thaliana] gb|AAL32929.1| nucleic acid binding protein-like [Arabidopsis thaliana] gb|AAM47893.1| nucleic acid binding protein-like [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Putative N-terminus
uagpf_v2_unigene52676 uagpf v2.0 480
AutoFact: PHD finger/nucleic acid binding protein [Olimarabidopsis pumila] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain