Sustainpine_db
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Assembly Name: uagpf v2.0

Name: dna binding

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene16203 uagpf v2.0 642
AutoFact: putative AT-hook DNA-binding protein [Oryza sativa Japonica Group] gb|EAZ07603.1| hypothetical protein OsI_29854 [Oryza sativa Indica Group] 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene17434 uagpf v2.0 619
AutoFact: PHD finger/nucleic acid binding protein [Olimarabidopsis pumila] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene17466 uagpf v2.0 1564
AutoFact: PHD finger/nucleic acid binding protein [Olimarabidopsis pumila] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
uagpf_v2_unigene18234 uagpf v2.0 1013
AutoFact: putative AT-hook DNA-binding protein [Oryza sativa Japonica Group] gb|EAZ07603.1| hypothetical protein OsI_29854 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene18429 uagpf v2.0 821
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDQ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene25066 uagpf v2.0 507
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene26218 uagpf v2.0 520
AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 2.0e-05
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene27597 uagpf v2.0 492
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDQ4_RICCO 0.0
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene27600 uagpf v2.0 303
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene28422 uagpf v2.0 367
AutoFact: abscisic acid responsive element-binding protein 2 [Populus suaveolens] 9.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene28725 uagpf v2.0 540
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9R7B1_RICCO 3.0e-11
FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
Blast2go: dna binding 1.21021e-11
N-terminus
uagpf_v2_unigene29464 uagpf v2.0 336
AutoFact: Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] gb|AEE76957.1| Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: dna binding 5.29453e-16
Internal
uagpf_v2_unigene30988 uagpf v2.0 193
AutoFact: PHD finger protein-like n=2 Tax=Oryza sativa RepID=Q5N7H9_ORYSJ 7.0e-25
Blast2go: dna binding 5.45517e-29
unknown
uagpf_v2_unigene32008 uagpf v2.0 602
AutoFact: DUF3594 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene32098 uagpf v2.0 517
AutoFact: AT-hook DNA-binding protein [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene32605 uagpf v2.0 547
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9STX4_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene32973 uagpf v2.0 154
AutoFact: PREDICTED: ripening-related bZIP protein-like isoform 2 [Vitis vinifera] ref|XP_002284785.1| PREDICTED: ripening-related bZIP protein-like isoform 1 [Vitis vinifera] emb|CAB85632.1| putative ripening-related bZIP protein [Vitis vinifera] 2.0e-38
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene33174 uagpf v2.0 376
AutoFact: Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] gb|AEE76957.1| Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] 9.0e-14
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: dna binding 2.57244e-25
Internal
uagpf_v2_unigene38141 uagpf v2.0 266
AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 0.0
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene38449 uagpf v2.0 455
AutoFact: putative PHD zinc finger protein [Ipomoea trifida] dbj|BAF36299.1| hypothetical protein [Ipomoea trifida] 0.0
FL-Next: tr=PHD finger family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: dna binding 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain