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Assembly Name: uagpf v2.0

Name: pentatricopeptide repeat-containing

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene506 uagpf v2.0 371
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 2.14399e-43
Internal
uagpf_v2_unigene1918 uagpf v2.0 587
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71060, mitochondrial; Flags: Precursor gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Ar 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
C-terminus
uagpf_v2_unigene2449 uagpf v2.0 644
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71060, mitochondrial; Flags: Precursor gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Ar 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 4.20494e-39
Putative C-terminus
uagpf_v2_unigene2772 uagpf v2.0 1126
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQZ0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
C-terminus
uagpf_v2_unigene5144 uagpf v2.0 769
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SPI6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
C-terminus
uagpf_v2_unigene5407 uagpf v2.0 617
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RGU0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Internal
uagpf_v2_unigene5718 uagpf v2.0 556
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T0C2_RICCO 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 5.33659e-07
Putative N-terminus
uagpf_v2_unigene6067 uagpf v2.0 714
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745 dbj|BAB11377.1| unnamed protein product [Arabidopsi 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Putative coding
uagpf_v2_unigene8068 uagpf v2.0 430
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q94JX6.2|PP391_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18390, mitochondrial; Flags: Precursor gb|AED92549.1| pentatricopeptide repeat-containing protein [Ara 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Internal
uagpf_v2_unigene8075 uagpf v2.0 535
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745 dbj|BAB11377.1| unnamed protein product [Arabidopsi 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Putative C-terminus
uagpf_v2_unigene8603 uagpf v2.0 532
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQZ0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Internal
uagpf_v2_unigene8813 uagpf v2.0 695
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q94JX6.2|PP391_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18390, mitochondrial; Flags: Precursor gb|AED92549.1| pentatricopeptide repeat-containing protein [Ara 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
N-terminus
uagpf_v2_unigene9066 uagpf v2.0 295
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.22973e-33
N-terminus
uagpf_v2_unigene10048 uagpf v2.0 291
• AutoFact: PPR-repeat protein-like [Oryza sativa Japonica Group] gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group] 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 4.2039e-45
Internal
uagpf_v2_unigene13306 uagpf v2.0 545
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RBA6_RICCO 5.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.33555e-13
Complete
uagpf_v2_unigene25070 uagpf v2.0 447
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71060, mitochondrial; Flags: Precursor gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Ar 3.0e-37
• Blast2go: pentatricopeptide repeat-containing 0.0
unknown
uagpf_v2_unigene26999 uagpf v2.0 247
• AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Internal
uagpf_v2_unigene31262 uagpf v2.0 311
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y0_RICCO 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Putative coding
uagpf_v2_unigene32463 uagpf v2.0 253
• AutoFact: pfam01535, PPR, PPR repeat 3.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 8.20701e-17
N-terminus
uagpf_v2_unigene32727 uagpf v2.0 222
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SNN7_RICCO 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain