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Assembly Name: uagpf v2.0

Name: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene32345 uagpf v2.0 346
AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 2.0e-05
FL-Next: tr=Putative retrotransposon polyprotein; Ipomoea batatas (Sweet potato) (Convolvulus batatas). 0.0
Internal
uagpf_v2_unigene36889 uagpf v2.0 461
AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Blast2go: gag-pol polyprotein 7.86207e-38
Internal
uagpf_v2_unigene39270 uagpf v2.0 408
AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 4.0e-05
Putative coding
uagpf_v2_unigene44879 uagpf v2.0 399
AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein partial 8.25498e-25
Putative Complete
uagpf_v2_unigene47411 uagpf v2.0 432
AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
Blast2go: gag-pol polyprotein 1.02965e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain