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Assembly Name: uagpf v2.0

Name: RVT_2 domain containing protein

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene393 uagpf v2.0 504
AutoFact: RVT_2 domain containing protein 8.0e-09
unknown
uagpf_v2_unigene25783 uagpf v2.0 592
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
uagpf_v2_unigene27342 uagpf v2.0 261
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
uagpf_v2_unigene32867 uagpf v2.0 323
AutoFact: RVT_2 domain containing protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 3.13617e-26
Putative N-terminus
uagpf_v2_unigene34221 uagpf v2.0 386
AutoFact: RVT_2 domain containing protein 2.0e-09
unknown
uagpf_v2_unigene35522 uagpf v2.0 413
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical retrotransposon 0.0
Internal
uagpf_v2_unigene40650 uagpf v2.0 408
AutoFact: RVT_2 domain containing protein 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon ty1-copia subclass 2.07451e-18
N-terminus
uagpf_v2_unigene42666 uagpf v2.0 331
AutoFact: RVT_2 domain containing protein 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.96629e-09
Putative N-terminus
uagpf_v2_unigene45095 uagpf v2.0 303
AutoFact: RVT_2 domain containing protein 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_004365 [Vitis vinifera] 6.7487e-21
Internal
uagpf_v2_unigene46949 uagpf v2.0 436
AutoFact: RVT_2 domain containing protein 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon like protein 9.94944e-16
Putative N-terminus
uagpf_v2_unigene47082 uagpf v2.0 133
AutoFact: RVT_2 domain containing protein 1.0e-05
unknown
uagpf_v2_unigene51261 uagpf v2.0 288
AutoFact: RVT_2 domain containing protein 4.0e-26
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_028342 [Vitis vinifera] 1.91795e-25
Internal
uagpf_v2_unigene53497 uagpf v2.0 338
AutoFact: RVT_2 domain containing protein 1.0e-21
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_032634 [Vitis vinifera] 7.78368e-24
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain