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Assembly Name: uagpf v2.0

Name: Pumilio RNA-binding repeat

Term: IPR001313  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene41211 uagpf v2.0 363
AutoFact: DUF632 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bzip transcription factor bzip133 0.0
Internal
uagpf_v2_unigene45418 uagpf v2.0 281
AutoFact: Os01g0844800 protein n=3 Tax=Oryza sativa RepID=Q0JHT2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein Sb04g037410; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: pumilio homolog 2-like 0.0
Internal
uagpf_v2_unigene46677 uagpf v2.0 223
AutoFact: Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] emb|CAL57619.1| Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] 1.99965e-42
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene48216 uagpf v2.0 268
AutoFact: Os01g0844800 protein n=3 Tax=Oryza sativa RepID=Q0JHT2_ORYSJ 0.0
Blast2go: pumilio homolog 2-like 0.0
unknown
uagpf_v2_unigene49079 uagpf v2.0 302
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene49562 uagpf v2.0 293
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
Blast2go: pumilio homolog 2-like 0.0
Putative coding
uagpf_v2_unigene50759 uagpf v2.0 416
AutoFact: pumilio domain-containing protein PPD1 [Populus tremula x Populus tremuloides] 2.0e-38
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene54870 uagpf v2.0 281
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pumilio homolog 2-like 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain